Hydrogenophaga sp. RAC07: BSY239_2003
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Entry
BSY239_2003 CDS
T04455
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY239_2003 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_2003 (nth)
Enzymes [BR:
hyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSY239_2003 (nth)
DNA repair and recombination proteins [BR:
hyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSY239_2003 (nth)
Prokaryotic type
BSY239_2003 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AOF84446
UniProt:
A0A1B3LUC3
LinkDB
All DBs
Position
2114490..2115125
Genome browser
AA seq
211 aa
AA seq
DB search
MKTAQIEAFFATLQAANPTPQTELEYTSVFELLAAVLLSAQATDVGVNKATRRLFPVANT
PQKILDLGLEGLEGYIKTIGLYRSKARHLMEACRMLVEQHGGEVPRTREALEALPGVGRK
TANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKTPLAVEQQLLKRVPPAYAVDSHHWLI
LHGRYVCQARKPLCPKCAVIAYCDFRDKTPA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgcccagatcgaagccttcttcgccacgctccaggccgccaatcccaccccg
cagaccgagctcgaatacaccagcgtgttcgagctgctggccgccgtgctgctctcggcc
caggcgaccgatgtgggcgtgaacaaggccacgcgcaggctgtttccggtggcgaacacg
ccgcaaaaaatcctggacctcgggctcgaaggactggagggctacatcaagaccatcggc
ctgtaccgcagcaaggccaggcacctcatggaagcctgccgcatgctcgtggagcaacac
ggcggcgaggtaccgcgcacgcgcgaagcgctcgaagccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacgtggcctttggccagcccaccatggcggtggacacgcac
atttttcgcgtgagcaaccgcaccggcctggcgcccggcaagacgccgctggcggtggag
cagcagttgttgaagcgtgtgccacccgcctacgcggtggattcgcaccactggctgatc
ctgcacgggcgctatgtgtgccaggcgcgcaagccgctgtgcccgaagtgcgcggtgatc
gcgtactgcgatttcagggacaagaccccggcctga
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