Hydrogenobaculum sp. SN: HydSN_1409
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Entry
HydSN_1409 CDS
T02516
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys01501
beta-Lactam resistance
hys01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HydSN_1409
01503 Cationic antimicrobial peptide (CAMP) resistance
HydSN_1409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hys03036
]
HydSN_1409
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hys02000
]
HydSN_1409
01504 Antimicrobial resistance genes [BR:
hys01504
]
HydSN_1409
Chromosome and associated proteins [BR:
hys03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HydSN_1409
Transporters [BR:
hys02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HydSN_1409
Antimicrobial resistance genes [BR:
hys01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HydSN_1409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
OEP
TarH
PTS_EIIA_1
GpP-like_1st
YscO
CusB_dom_1
TMCO5
PI3K_P85_iSH2
Motif
Other DBs
NCBI-ProteinID:
AGH93982
LinkDB
All DBs
Position
complement(1292436..1293560)
Genome browser
AA seq
374 aa
AA seq
DB search
MSALKKYVLYFIIPMVVIILWLGGFFEHKISPGEKPLKPKVISNVKVITVSSSTPIEEEF
DGVVSAKNHAAISTRLMSKVIGVYVKDGDCVKRGQLLVKLDTKDISSMVAEANYGAKQAE
DQMKAAEANLQAISKTYQRFQKLIKTGAVTEQEYDEVKAKYEAAKAMVEQAKNAIMAAKA
GASAAGANLAYANITAPFSGCIYMKNVNVGDIAAPGMPLMMIDKPPYRVDVALPEKYINK
ITPGQTLKVYIGGIDKTVEGTVKEVSKALNPMSHTFDVKIDIPNQDGITSGLYAKVYIPK
SQETVVTIPKDALFKWDDIDAVWLVDKNNITHMQFVKLGQKVGDSYVVLSGLKPGDRIVE
GNVYNVCDKCKIGE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctctcaagaagtacgttctttattttataataccaatggttgttatcatactt
tggcttggtgggttttttgagcataagatttctcctggtgaaaagcccctaaaaccaaag
gttatttcaaatgtaaaagttataacagtatcctcttccacacctatagaagaagagttt
gacggtgtagtgagcgctaaaaaccacgctgctatctccacaaggcttatgagcaaagtg
ataggagtatatgtaaaagatggggattgtgtaaaaagaggacagcttttggtaaaactt
gatacaaaagatatatcaagtatggtagctgaagcaaattacggagccaaacaagctgag
gaccagatgaaagcagccgaagctaacttacaagctatctcaaaaacctatcaaagattt
caaaagcttataaaaacaggagcagtaacagagcaagagtacgatgaggtaaaagctaag
tacgaagcagcaaaggctatggtagaacaagccaaaaacgctataatggctgcaaaagct
ggagcatctgccgccggggcaaacttagcctatgcaaatataacagctcctttttcagga
tgcatatacatgaaaaatgtaaacgttggagatatagcagcccctggtatgcctcttatg
atgatagataaaccaccatacagagtagatgtggcattaccagaaaagtatataaacaaa
ataaccccaggacaaacgttaaaagtatatataggtggtatagacaaaacagtagaaggt
actgtaaaagaagtatccaaagctttaaaccctatgtctcatacgtttgatgtaaaaata
gatataccaaaccaagatggcatcacaagcgggctttacgcaaaagtttatattcctaaa
agccaagaaactgtcgttactataccaaaggatgcactgtttaaatgggatgatatagat
gcggtatggctagtagacaaaaacaacataacccatatgcagtttgtaaagcttggtcaa
aaggtaggcgatagctacgttgtactatctggtttaaaaccaggggatagaatagtggaa
ggaaacgtatacaacgtttgcgataaatgcaagataggagagtaa
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