Hydrogenophaga sp. YM1: JNX00_06365
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Entry
JNX00_06365 CDS
T10285
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy01501
beta-Lactam resistance
hyy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNX00_06365
01503 Cationic antimicrobial peptide (CAMP) resistance
JNX00_06365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hyy03036
]
JNX00_06365
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyy02000
]
JNX00_06365
01504 Antimicrobial resistance genes [BR:
hyy01504
]
JNX00_06365
Chromosome and associated proteins [BR:
hyy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JNX00_06365
Transporters [BR:
hyy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JNX00_06365
Antimicrobial resistance genes [BR:
hyy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNX00_06365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
OEP
Motif
Other DBs
NCBI-ProteinID:
QRR35487
LinkDB
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Position
complement(1304339..1305490)
Genome browser
AA seq
383 aa
AA seq
DB search
MTTSRLRKTLYWALAGLAVAALALGVVRALHKRSAQAAQANAAAQALQTAPVYEVAARDV
FTVRRLALQQTAEVSGSLVAVQTVAIKARVAGELQGLNKREGDSVAANEVVARIDPTEPQ
ARVRQAEQQAESALAQVRIAQRNQNNNQALVQQGFISATALDTSQANLAAAEANHRAAMA
ALDIARKSLADTVLRSPIAGQIASRPVRNGERVGVDTRVLEVVDLSAFEVEAALSPADAA
RIAPGQRARLVVEGLPEPVNATVARINPSVQAGSRSVLVYLRLTAQPGMRQGLFARGGIV
AGTVEAPAVPVSAIRNDRPEPYVQVLRDGVVKHVGLTPAPTGSVDGVPHQAVPALAEGDT
VLAATAGAIRDGTRVNLAAAAKP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctcccgtctgcgaaagaccctctactgggccctggccgggctggccgtggcc
gcgctggccctgggcgtggtgcgcgcgctgcacaagcgcagcgcccaggccgcgcaggcg
aacgccgccgcccaggccctgcagaccgcgccggtctacgaggtcgccgcgcgtgacgtg
ttcacggtgcgccgcctcgcgctgcagcaaacggccgaggtctcgggttcgctggtggcg
gtgcagaccgtggccatcaaggcgcgtgtggccggcgagctgcaaggcctgaacaagcgc
gagggcgacagcgtggccgccaacgaggtggtcgcgcgcatcgacccgaccgagccgcag
gcgcgcgtgcgacaggccgagcagcaggccgagtcggcgctggcgcaggtgcgcatcgcg
cagcgcaaccagaacaacaaccaggccctggtgcagcagggcttcatctcggccaccgcg
ctggacacctcgcaggccaacctggccgcggccgaggccaaccaccgcgcggccatggcc
gcgctggacatcgcacgcaaatcgctcgccgacacggtgctgcgctcgcccatcgccggc
cagatcgccagccggccggtgcgcaacggcgagcgcgtgggcgtcgacacccgcgtgctc
gaggtggtggacctctcggcctttgaggtagaggccgcgctgagcccggccgacgccgcg
cgcatcgccccgggccagcgcgcgcgcctggtggtggagggcctgcccgaaccggtgaac
gccacggtggcgcgcatcaaccccagcgtgcaggccggcagccgcagcgtgctggtctac
ctgcggctgaccgcccagccgggcatgcgccagggccttttcgcgcgcggcgggatcgtg
gccggcacggtcgaggccccggccgtgccggtgtcggccatccgcaacgaccggcccgag
ccctacgtgcaggtgctgcgcgacggcgtggtcaagcacgtgggcctgacgcccgcgccc
acgggcagcgtagacggcgtgccccaccaggcggtgcccgccctggccgagggcgacacc
gtgctggcggccacggccggcgccatccgcgacggcacgcgcgtgaacctggccgccgcg
gccaagccctga
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