Hydrogenophaga sp. YM1: JNX00_09595
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Entry
JNX00_09595 CDS
T10285
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy01501
beta-Lactam resistance
hyy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNX00_09595
01503 Cationic antimicrobial peptide (CAMP) resistance
JNX00_09595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyy02000
]
JNX00_09595
01504 Antimicrobial resistance genes [BR:
hyy01504
]
JNX00_09595
Transporters [BR:
hyy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JNX00_09595
Antimicrobial resistance genes [BR:
hyy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNX00_09595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QRR36081
LinkDB
All DBs
Position
2065089..2068184
Genome browser
AA seq
1031 aa
AA seq
DB search
MQLPEVAIRRPVFATVLSLLILLVGLVSFNNLTVREYPRIDEPTVTVTTRFGGASSEVIE
SQVTKVLEDSLAGIEGVDIITSISRQEQSQITVRFKLERDPDSAAADVRDKVSRVRQRLP
DDVDEPTIAKVEADATPVIWLALNSDTVSALELSDVANRLIKPRLQTAPGAADVRIWGER
RFSMRIWLDPDRLAAYNLTVQDVEDALRRSNLEVPAGRIESSQREFNVTAATDVQTPEQF
RAIGIRTVKGQTIRIGDVARVEQAPQDERTSVRYNGRDAVSLGVIRQATANPLELSAAVQ
NMLPSITAELPKGVSIEVANDNSIFIDRSIKAVYTTIAEAVVLVALVIFLFLRTLRASVI
PLITIPVSLIGSFALMGLFGFSINTLTLLALVLAIGLVVDDAIVMLENIYRHIEEGMKPF
DAAIKGAREIGFAIVAMTLTLAAVYAPLAFTPGRTGRLFAEFALALAGAVVVSGFVALTL
SPMMCSKLLRHVDQPGRFDRFMERVLVRINQGYDRLLGLSLQVRWLVVGVMLASAGASWW
LLSTTRSELAPMEDRGVVLANINGPDGATLAYTRRYVDAIEKMAREQPEFDRIFAVVGNP
SVAQGSVTMRGKAWEERDRSTMEIARALAPRMAALPGISAYPITPPSLGQGFRERPLNFV
IVTNDTYENLSAVVRQFQDRMAQNPGLVQVDTDLRLNKPEIRMDVDRERAADMGVSVDAI
ARTVETMLGGRTVTRYKRDGEQYDVVVQTVSANRSTPEDIDRLFVRGRGDAMIPLASLIS
TREVVVPRELNHFGQRRSASITANVAPDYSLGEALRFMEQTAREILPAGYATDLNGQSRE
FRNASGSLALVFVLSLLFIYLVLSAQFESFVDPFIIMLSVPLSMMGALLALKLSGGTLNV
FSQIGLITLVGLITKHGILIVEFSNQLREQGLEKLDAVKQAAGLRLRPIMMTTGAMVLGA
IPLALATGAGAESRQQIGWVIVGGMSVGTLLTIFVVPTMYTLLSRRQSGESAHPVMHDEA
GGDHAGAIPAK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcccgaagtcgccatccgccggccggtgttcgccaccgtgctgtcgctgctc
atcctgctggtgggcctggtctcgttcaacaacctcaccgtgcgcgagtacccgcgcatc
gacgagcccaccgtcaccgtcaccacccgcttcggtggcgcctccagcgaggtgatcgag
tcccaggtcaccaaggtgctggaagactcgctcgccggcatcgagggggtggacatcatc
acctccatcagccggcaggagcagagccagatcacggtgcgcttcaagcttgagcgcgac
cccgactccgccgccgccgacgtgcgcgacaaggtcagccgcgtgcgccagcgactgccc
gacgacgtcgacgagcccaccatcgccaaggtcgaggccgacgccacgcccgtcatctgg
ctcgcgctcaactccgacacggtgtcggccctggagctcagcgacgtggccaaccgcctc
atcaagccgcgcctgcagacggcgcccggcgcggccgacgtgcgcatctggggcgagcgg
cgcttctccatgcgcatctggctcgacccggaccgcctggccgcctacaacctgaccgtg
caggacgtggaggacgcgctgcgccgctccaatctggaggtgccggccgggcgcatcgag
agttcgcagcgcgagttcaacgtgacggccgccaccgacgtgcagacgcccgagcagttc
cgcgccatcggcatccgcacggtcaagggccagaccatccgcatcggcgatgtggcgcgc
gtggagcaggcgccccaggacgagcgcacctcggtgcgctacaacggccgcgacgccgtg
tcgctgggcgtgattcgacaggccacggccaacccgctggagctgtcggccgcggtgcag
aacatgctgcccagcatcaccgccgaactgcccaagggcgtgagcatcgaggtcgccaac
gacaactccatcttcatcgaccgctccatcaaggcggtctacaccaccatcgccgaagcg
gtggtgctggtggcgctggtgatcttcctgttcctgcgcacgctgcgcgcctcggtcatt
ccgctgatcaccatcccggtcagcctgatcggctccttcgcgctgatgggcttgttcggc
ttctccatcaacacgctcacgctgctggcgctggtgctggccatcggcctggtggtggac
gacgccatcgtgatgctggagaacatctaccgccacatcgaggagggcatgaagcccttc
gacgcggcgatcaagggcgcgcgcgagatcggtttcgccatcgtggccatgacgctcacg
ctggcggcggtgtacgcgccgctggccttcacgccggggcgcaccgggcggctgttcgcc
gagttcgcgctggcgttggcgggtgcggtggtggtctcgggcttcgtggcgctcacgctt
tcgcccatgatgtgctccaagctgctgcgccacgtggaccagcccggccgcttcgaccgc
ttcatggagcgtgttctggtgcgcatcaaccagggctacgaccgcctgctgggcctgtcg
ctgcaggtgcgctggctggtggtgggcgtgatgctcgccagcgctggcgcgagctggtgg
ctgctgagcaccacgcgctcggagctggcgcccatggaagaccgcggcgtggtgttggcc
aacatcaacgggcccgacggcgccaccctggcctacacgcgccgctacgtggacgcgatc
gagaagatggccagggaacagccggagttcgaccgcatcttcgcggtggtgggcaacccc
tcggtggcgcagggcagcgtgaccatgcgcggcaaggcctgggaggagcgcgaccgcagc
accatggagatcgcgcgcgcgctggcgccgcgcatggcggcgctgcctggcatcagcgct
tacccgatcacgccgccctcgctgggccagggctttcgcgagcgaccgctcaacttcgtc
atcgtcaccaacgacacctacgaaaacctctcggccgtcgtgcgccagttccaggaccgc
atggcgcagaacccgggcctggtgcaggtcgacaccgacctgcgcctgaacaagcccgag
atccgcatggacgtggaccgcgagcgcgcggccgacatgggggtgagcgtggacgccatc
gcgcgaacggtggaaaccatgctgggcgggcgcacggtcacgcgctacaagcgcgacggc
gaacagtacgacgtggtggtgcagaccgtctcggccaaccgcagcacgcccgaggacatc
gaccggctgttcgtgcgcgggcgcggcgacgcgatgatcccgctcgcctcgctgatcagc
acgcgtgaggtggtggtgccgcgcgaactgaaccacttcggccaacgccgcagcgcctcg
atcacggccaacgtggcgcccgactattcgctgggcgaagccctgcggttcatggaacag
acggcgcgcgagatcttgcctgcgggctacgccaccgacctgaacggccagagccgcgag
ttccgcaacgcctcgggctcgctggcgctggtgttcgtgctgtcgttgctgttcatctac
ctggtgctgtcggcgcagttcgagagcttcgtcgatcccttcatcatcatgctgtcggtg
ccgctgtcgatgatgggcgcgctgctggcgctcaagctctcagggggcacgctgaacgtg
ttcagccagatcggcctgatcacactggtgggcttgatcaccaagcacggcatcctgatc
gtggagttctccaaccagctgcgcgagcagggactggagaagctggacgcagtgaagcag
gcggccggcctgcgcctgcggcccatcatgatgaccacgggcgccatggtgctgggcgcg
atcccgctggccctggccaccggcgcgggcgccgaaagccgccaacagatcggctgggtg
atcgtgggcggcatgtcggtgggcacgttgctcaccatcttcgtggtgccgacgatgtac
acgctgctgtcgcgccgccagtcgggcgagtcggcgcacccggtgatgcacgacgaggcg
ggtggcgatcacgccggggcgatacccgccaagtag
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