Hydrogenophaga sp. YM1: JNX00_10015
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Entry
JNX00_10015 CDS
T10285
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy01501
beta-Lactam resistance
hyy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNX00_10015
01503 Cationic antimicrobial peptide (CAMP) resistance
JNX00_10015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyy02000
]
JNX00_10015
01504 Antimicrobial resistance genes [BR:
hyy01504
]
JNX00_10015
Transporters [BR:
hyy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JNX00_10015
Antimicrobial resistance genes [BR:
hyy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNX00_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QRR36158
LinkDB
All DBs
Position
2148749..2151907
Genome browser
AA seq
1052 aa
AA seq
DB search
MAKFFIDRPIFAWVIALFVIVMGAVSITQLPIAQYPPVAPPSITINATYPSASAKTLEDS
VLSIIEQEMNGSPGLIYMESVAQANGTGSITLSFQPGTNPALAQVDVQNRLSRASPRLPA
AVTQQGVRVDQARSNFLLFTILTSDDPKWDPVALGDYATRSVLPEIQRVPGVGQAQLFGT
ERAMRIWIDPAKLLGFNLSAADVNAAIRAQNAQVSAGEIGALPNVAGQGISATVVVNGQL
GTVEEFGNIVLRASPGGATVRLKDVARIELGAQAYATSARLNGKPSTGIGVQLSASGNAL
ATADAVRAKLTELERFFPEGMSWTIPYDSSRFVKISIQQVAQTLLEAVALVFLVMFLFLQ
NFRYTIIPTIVVPVALLGTFAVLLAMGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
SEEGLPPLQATRKAMGQISGAIIGVTVVLISVFVPLAFFSGSVGNIYRQFAAVMGVSIAF
SAFMALSLTPALCATLLKPVPKGHHVEKKGFFGWFNRGFARTTGGYSRTVSALLPRAGRM
LIVYLAIGAAAAWVYVNLPTSFLPNEDQGTMLVNVQLPPGATQERTLEVMEQVEGFVLKQ
PEVESMVSVLGFSFSGQGQNAALAFVTLKDWAERHAPGSSAEAVAGRAFGALMGIRDAFI
YPLSPPPIPELGASSGFSFRLQDRGGLGREALTQARGQLLQLAAQSPVLAQVRPDGLEDA
PQLQLDIDRDRAQALGVGFDAINAAIGTALGSSYVNDFPNSGRLQRVVVQAEAAARMQPD
DLLRLNVVNNRGQAVPLSAFASTKWITGPMQTVRYNGYPTMRISGMAAPGYSTGAALNEM
ERLAAQLPQGIGYEWTGTSREEKLAGAQAMVLYGFAILAVFLCLAALYESWTIPLSVILV
VPLGVVGVLLATLLRGYQNDVYFQVGLITIIGLSAKNAILIIEFAKDVQAQGKSAMEAAL
AAARLRFRPIIMTSMAFTLGVVPLFIASGAGSASQRAIGTGVIGGMISGTLLAVFFVPLF
FVVVRRFFKGSERQHQRDRDSARAHGVDNDES
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtttttcatcgaccggcccatcttcgcgtgggtgatcgcgttgttcgtgatc
gtgatgggcgcggtctccatcacgcagctccccatcgcgcagtacccgccggtggcgccg
ccctccatcacgatcaacgccacctaccccagtgcgtccgccaagacgctcgaggattcg
gtgctgtccatcatcgagcaggaaatgaacggctcgcccggcctgatctacatggagtcg
gtggcccaggccaacggcaccggctcgatcacgctgagtttccagcccggcaccaacccg
gcgctggcgcaggtggacgtgcagaaccggctgtcgcgtgcctcgccgcgcctgccggcg
gccgtgacgcagcagggtgtgcgcgtggaccaggcgcgcagcaacttcttgctcttcacc
atcctcaccagcgacgaccccaaatgggatccggtggcgctgggcgattacgccacgcgc
agcgtgctgcccgaaatccagcgcgtgcccggcgtgggccaggcccagctgttcggcacc
gagcgcgccatgcgcatctggatcgatccggccaaactgctcggtttcaacctgagcgcg
gccgacgtgaacgcggccatccgcgcgcagaacgcccaggtctcggcgggtgaaatcggc
gccctgcccaacgtggcggggcagggcatctcggccaccgtggtggtcaacggtcagctc
ggcacggtggaggagtttggcaacatcgtgctgcgcgcctcccccggcggcgccaccgtg
cgcctgaaggacgtggcgcgcatcgaactcggcgcgcaggcctacgccacctcggcccga
ctgaacggcaagccctccaccggcatcggcgtgcagctgtcggccagtggcaatgcgctg
gccacggccgacgcggtgcgcgccaagcttaccgagctggagcgcttcttccccgagggc
atgagctggaccattccctacgacagctcgcgcttcgtcaagatctccatccagcaggtg
gcgcagacgctgctggaggccgtggcgctggtgttcctggtgatgttcctgttcctgcag
aacttccgctacaccatcatcccgaccatcgtggtgccggtggcgctgctgggcaccttc
gccgtgctgctggccatgggcttctcgatcaacgtgctcaccatgttcggcatggtgctg
gtgatcggtatcgtggtggacgacgccatcgtggtggtggagaacgtcgagcgcatcatg
agcgaggaaggcttgccacccttgcaggccacgcgcaaggccatgggccagatctcgggc
gccatcatcggcgtgaccgtggtgctgatctcggtgttcgtgccgctggccttcttcagc
ggctcggtggggaacatctaccgccagttcgcggcggtgatgggcgtgtccatcgccttc
tcggccttcatggcgctgtcgctcacgcccgcgctgtgcgccacgctgctcaagcccgtg
cccaaggggcaccacgtcgagaagaagggtttcttcggctggttcaaccgcggcttcgcg
cgcaccaccggcggctactcacgcacggtgagcgcgctgctgccacgcgccggccgcatg
ctcatcgtctacctcgccatcggcgcggcggcggcctgggtgtacgtgaacctgcccacc
tccttcctgcccaacgaagaccagggcaccatgctggtgaacgtgcagctgcccccgggc
gccacgcaggagcgcacgctggaggtgatggagcaggtggagggcttcgtgctcaagcag
cccgaggtggaaagcatggtcagcgtgctgggcttcagcttctcggggcagggccagaac
gccgccctggccttcgtcacgctcaaggactgggccgagcgccacgcgcccggcagctcg
gccgaggccgtggcgggccgcgccttcggcgcgctcatgggcatccgcgacgccttcatc
tacccgctgagcccgccgccgattccggagctgggtgcgtcctcgggcttcagcttccgc
ctgcaggaccggggcggcctgggccgcgaggccctgacccaggcgcgcggacaattgctg
cagctggccgcgcaaagcccggtgctcgcccaggttcgccccgacggcctggaggacgcg
ccgcagctgcagctcgacatcgaccgcgaccgcgcgcaggcgctgggcgtgggcttcgac
gccatcaacgccgccatcggcaccgcgctgggttccagctacgtgaacgatttcccgaac
agtgggcgcctgcagcgcgtggtggtgcaggccgaggccgcggcgcgcatgcagcccgat
gacctgctgcggctgaacgtggtgaacaaccgcggccaggccgtgccgctgtcggccttc
gcgtccacgaagtggatcaccggacccatgcagacggtgcgctacaacggctaccccacc
atgcgcatcagcggcatggcggcgccgggctacagcacgggcgccgcgctcaatgagatg
gagcgcctggccgcgcagctgccgcagggcatcggctacgaatggaccggcacttcgcgc
gaggaaaagctcgccggcgcgcaggccatggtgctctatggcttcgccatcctcgcggtg
ttcctgtgcctggcggcgctgtacgaaagctggaccatcccgctgtcggtgattttggtg
gtgccgctgggggtggtcggggtgctgctggccacgctcttgcgtggctaccagaacgac
gtgtacttccaggtcggcctgatcacgatcattggcctgtcggcgaagaacgcgatcctg
atcatcgagttcgcgaaggacgtgcaggcccagggcaagagcgccatggaagcggcattg
gccgcggcccgcctgcgtttcaggcccatcatcatgacctcgatggccttcacgttgggc
gtggtgccgctgttcatcgcgtcgggcgcgggctcggccagccagcgcgccatcggcacc
ggcgtgatcggcggcatgatctccggcaccctgctggccgtgttcttcgtgcccctgttc
ttcgtggtggtgcgccgcttcttcaagggcagcgagcgccagcaccagcgcgaccgcgac
agcgcgcgcgcacatggagtcgacaacgatgaatcctga
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