Hydrogenophaga sp. YM1: JNX00_15025
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Entry
JNX00_15025 CDS
T10285
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JNX00_15025 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_15025 (nth)
Enzymes [BR:
hyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JNX00_15025 (nth)
DNA repair and recombination proteins [BR:
hyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JNX00_15025 (nth)
Prokaryotic type
JNX00_15025 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QRR32968
LinkDB
All DBs
Position
3190003..3190638
Genome browser
AA seq
211 aa
AA seq
DB search
MKRELIEPFFATLKASNPSPQSELEYTTVFELLAAVLLSAQATDVSVNKATRQLFPVANT
PQAILALGLQGLEGYIKTIGLFRSKARHLMETCRILVERHGGAVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVELALMKRVPPEYAVDSHHWLI
LHGRYVCLARKPQCHRCAVAAYCDFTPKTAG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgagctgatcgaacccttcttcgccaccctgaaggcgagcaaccccagcccc
cagtcggagttggaatacaccaccgtcttcgagctgctggccgccgtgctgctgtcggcc
caagccaccgacgtgagcgtcaacaaggccacgcgccagctgttccccgtggccaatacg
ccgcaggccatcttggccctggggctgcaggggctggagggctacatcaagaccatcggc
ctgttccgcagcaaggcccgacacctcatggagacctgccgcatcctggtggagcgccac
ggcggcgcggtgccacgcacgcgcgaggcgctggaggccctgcccggcgtcggccgcaag
acggccaacgtggtgctcaacgtggccttcggcgagcccaccatggcggtggacacgcac
atctttcgcgtcagcaaccgcaccggcctggcgccgggcaagaccccgctggccgtggaa
ctggcgctgatgaagcgcgtgccgcccgagtacgcggtggactcgcaccactggctcatc
ctgcacgggcgctacgtgtgcctggctcgcaagccgcagtgccaccgctgcgcggtggcg
gcgtactgcgacttcacgcccaagacggcgggttga
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