Hymenobacter sp. PAMC 26628: AXW84_21015
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Entry
AXW84_21015 CDS
T04961
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Pathway
hyz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AXW84_21015
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyz01007
]
AXW84_21015
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyz03016
]
AXW84_21015
Enzymes [BR:
hyz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
AXW84_21015
Amino acid related enzymes [BR:
hyz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AXW84_21015
Transfer RNA biogenesis [BR:
hyz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AXW84_21015
Prokaryotic type
Other AARSs
AXW84_21015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AMJ67621
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All DBs
Position
4859653..4863219
Genome browser
AA seq
1188 aa
AA seq
DB search
MKYPEYKQPLDYAKVGEDVLAWWQQNHIFEKSVRSREGQPTFVFYEGPPSANGAPGIHHV
MARAVKDIFCRYQTMLGKQVPRKGGWDTHGLPIELQVEKELGITKEDIGHKISIEDYNQR
CKETVMRFKAQWDDLTQKMGYWVDLDNPYVTFEPEYIESCWALLKKLYDKGLLYKGYTIQ
PYSPAAGTGLSSHELNQPGTYKDVKDTTVVAQFKVKRDEVSEKLFAVLDKRRKIVDRSVA
SRESEEDAAEVEEVSFAPRNLFILAWTTTPWTLPANTGLAVGRSISYLLVATINPYTHEK
IAVVLARNLMSRYFDVKNIPGLDVDDSHYSAQNNGVGKDGKITQWNILAEFTGADLVGIN
YERLFNAEAGFPHFEGEENAFRVIPADFVTTEDGTGIVHISPTFGADDFRAAQLAGIPAL
MVPDDQGKLGPIVDRTGRYVAQMGEFGGRWVKNYDGHDQSGADYKTLDESIAIRMRTNGT
AFKTEKYEHTYPHCWRTDKPVLYYPLDSWFIKTTAVKDRLIELNKTINWKPESTGSGRFG
NWLENLVDWNLSRSRYWGTPLPIWRTQDRTEEICIGSIAELKAEIDKAVAAEVMTHNPYA
NGEKIDLHRPYVDDIFLVSPSGQPMYREPDLIDVWFDSGAVPYAQWHYPIENADVFAKNF
PADFIAEGVDQTRGWFFTLHALAVMLEDSVAFKNVIANGLVLAKDGQKMSKRLGNAVDPF
ATIKQFGPDATRWYLIANAPPWDNLKFDPAGVVEVQRRFFGTLFNTYSFYALYANLDGFE
IDENNRVPHVDLSELDRWVLSKLQSLIAEVRLQLDSYDPTKAARAIQDFVTDHLSNWYVR
LSRRRFWKGELTTDKRGAYETLHECLTTVAQLMAPIAPFFAEWLYQNLVGVELKVKSEEL
KDENSQVSNSQLSTLNFFSYIESVHLTLLAAADATRIDRALEERMELAQRISSLAHSLRK
KSVLKVRQPLQRILVPVLNDSTKEQVGLVEDLICAEINVKHIEFLTDESGVLVKSVKPNF
KRLGQQYGPRLKAVGARIQAMTAAEISQLEKEGSLAVEVNGEPITLAPDDVEIRTDDLPG
WLVATDGPLTVALDVTLTDELRQEGLARELVNRLQNLRKDSGLEVQDRIRVTLADQEPAL
TAAVAAFGDYIRTETQALALDFAPEVTGGSVLEFDDFAVPVRLEIATS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaaataccccgaatacaaacagccgctcgactacgccaaagtaggggaggacgtgctg
gcctggtggcagcaaaaccacatttttgaaaagagcgtgcgcagccgcgaaggccagccc
acgttcgtattttacgaggggcccccgtcggccaatggagccccgggcatccaccacgtg
atggcgcgggcggtgaaggacatcttctgccgctaccaaaccatgcttggcaagcaggtg
ccccgcaagggcggctgggacacccacggcctgcccatcgagctgcaagtggagaaggag
ctgggcatcacgaaggaggacatcggccacaaaatcagcatcgaggactacaaccagcgc
tgcaaggaaacggtgatgcgcttcaaggcccagtgggacgacctgacccagaaaatgggc
tactgggtggacctggataatccctacgtcaccttcgagcccgaatacatcgagagctgc
tgggccctgctcaagaagctttacgacaagggtctgctctacaaaggctataccatccag
ccctactcgcccgctgccggcaccggcctcagctcgcacgagctgaaccagcccggcacc
tacaaggacgtgaaggacacgacggtagtagcgcagtttaaggtgaagcgcgatgaggtt
tcggagaagctgtttgccgttcttgataaaagacgcaaaattgttgatagaagtgtagct
tctagagaatcagaagaagatgctgctgaggtagaagaggtatcatttgccccaagaaat
ttattcatcttggcttggacaacgactccttggaccttacccgcaaatacaggtctagca
gtagggcgaagcattagttacttgcttgttgcaacaattaatccctacacacacgagaaa
atcgcggtagtacttgctcgcaatctgatgagtcggtacttcgatgtgaaaaatattccc
ggtcttgacgttgacgattcgcattattccgcccaaaataatggtgttggaaaagatggt
aaaatcactcaatggaatattctagctgaattcaccggcgcggacctggttggcatcaac
tacgagcgcctattcaatgccgaggctggtttcccgcactttgagggcgaggaaaacgcg
tttcgcgtcatcccggccgactttgtaaccactgaagacggcacgggcatcgtgcacatc
tcgcccacgtttggcgcggacgacttccgggcggcgcagctggcgggcattccggccctg
atggtgcctgacgaccagggcaagctggggcccatcgtggaccgcacgggccgctacgtg
gcccaaatgggcgagtttggcggccgctgggtgaagaactacgacggccacgaccagagc
ggcgccgactacaaaacgctggacgagagcatcgccatccggatgcgcacgaacggcacg
gccttcaaaaccgagaagtacgagcacacctacccgcactgctggcgcaccgacaaaccg
gtgctctactacccgctcgactcgtggttcatcaagaccaccgcggtgaaggaccggctc
atcgagctcaacaaaaccatcaactggaagcccgaaagcaccggcagcggccgcttcggc
aactggctcgaaaacctggtggactggaacctcagccgctcgcgctactggggcacgccg
ctgcccatctggcgcacccaggaccgcaccgaggaaatctgcatcggcagcattgccgag
ctgaaggcggaaattgacaaggccgtcgcggccgaagtcatgacccacaatccctacgct
aacggcgagaaaattgacctgcaccggccctacgtggacgacattttcctcgtttcgccc
agcggccagcccatgtaccgcgagcccgacctcatcgacgtgtggtttgactcgggggcc
gtgccctacgcgcagtggcactacccaattgaaaacgccgacgtttttgccaagaacttt
ccggccgatttcatcgccgaaggcgtggaccaaacccgcggctggtttttcacgctgcac
gcgctggccgtgatgctagaggattcggtggcgttcaagaacgtgattgccaacggcttg
gtgctggccaaagacggccagaagatgagcaagcgcctcggcaacgccgtggacccgttt
gccaccatcaagcagtttgggcccgacgccacccgctggtacctcatcgccaacgcgccg
ccgtgggacaacctcaagttcgaccccgccggcgtggtggaggtgcagcgccgcttcttc
ggcacgctcttcaacacgtactcgttctacgccctgtacgccaacctcgacgggtttgaa
atcgacgaaaacaaccgcgttccgcacgtcgatttgagcgagctggaccgctgggtgctg
agtaagctccagtcgctcattgccgaagtgcgcttgcagcttgatagttatgacccgacg
aaggccgcccgcgccatccaggatttcgtgaccgaccacctctccaactggtacgtgcgc
ctctcgcgccgccgcttctggaagggcgaattgacgaccgacaagcgcggtgcctacgag
acgctgcacgagtgcctgactaccgtggcgcaactcatggcgcccatcgcgccgttcttc
gccgagtggctgtaccagaacttggtaggagtggagttaaaagttaaaagtgaagagtta
aaagatgaaaactcccaagtttctaactctcaactctcaactcttaacttcttcagctat
atcgaatcggtgcacctcacgctactggccgcggccgatgccacccgcatcgacagggcc
ctggaggagcgcatggaactggcccagcgcatcagctcgctggcccactcgctgcgcaag
aagtcggtgctgaaggtgcgccagcccttgcagcgcatcttggtgccagtactgaacgac
tcgaccaaggagcaagtcggcctcgtggaagacctgatttgcgccgaaataaacgtcaag
cacatcgagttcctgaccgatgagagcggcgtgctggtgaagtcggtgaagccgaacttt
aagcgcctgggccagcagtacgggccccggctgaaggccgtgggggcccggattcaggcc
atgacggcggcggaaatttcgcagctggagaaggagggaagcctcgccgtggaagtcaac
ggcgagcccatcaccctggcccccgacgacgtggaaatccgcaccgacgatttgcccggc
tggctcgtggccaccgatgggcccctaaccgtggccctcgacgtaaccctgaccgacgag
ttgcgccaggaaggcctcgcccgcgagctggtaaaccgcctccagaacctgcgcaaagac
tcgggcctggaagtgcaggaccgcatccgcgtgacgctggccgaccaggagcccgcccta
acggccgccgtggccgcctttggcgactatatccgcaccgaaacccaggccctggcgctc
gattttgcgccggaagtgacgggcggctcggtgctggaatttgacgacttcgcggtgccc
gtgcgcctcgaaatcgcaactagctga
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