Helicoverpa zea (corn earworm): 124641844
Help
Entry
124641844 CDS
T08400
Name
(RefSeq) dosage compensation regulator isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124641844
03012 Translation factors [BR:
hze03012
]
124641844
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124641844
5.6.2.6 RNA 3'-5' helicase
124641844
Spliceosome [BR:
hze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124641844
Translation factors [BR:
hze03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124641844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
dsrm
Helicase_C
DEAD
HA2_N
HA2_C
DND1_DSRM
nSTAND3
Dicer_dimer
AAA_19
ATPase
Motif
Other DBs
NCBI-GeneID:
124641844
NCBI-ProteinID:
XP_047036038
LinkDB
All DBs
Position
23:3793150..3808909
Genome browser
AA seq
1763 aa
AA seq
DB search
MDGKSFLYSWCAKKGLTPVYDIRATGPKHRQRFLCEVRVESITYVGAGNSTTKKEAQMNA
SKDFVSYLVRTGQVAANEVPEDTRTTVKNEDDDQGNGDIQQQQLMHEQQQQRSVFQDGMG
PQMMGQAYQAYGGQSQSSNFTYMDRMQQQKNVEEAEDLDVNASLHGNWTMENAKSKLHQF
LQINKINTDYMYKAVGPDHTRSFCCEMSIYVRQLGRNVTGRETASNKQTASKSCALSIVR
QLYHLGVIEAFSGTLKKDRSSEGIMKPYPVAISPELEQQLENTLRDLEIQPVTIDPSGTY
SSEEGQSGLTLLQVDRVKAMREARPTPGGVVSWSPPQANWNAWTGCNIDEGPLATTSLED
ISADLEKHHRDMCQNSTLYQESIREREQLPVYAMRSQIMEAINENPVIIIRGNTGCGKTT
QVCQFILDDYIASGQGAWANICVTQPRRISAVSVAERVASERCEDLANSVGYSVRFESML
PRPYGSIMFCTVGVLLRKLEGGLRGVSHVLVDEVHERDADTDFALILLRDMAHTYPDLRI
ILMSATVDTTLFTTYFGNCPVIEVPGRTYPVQQYFLEDCVELTKFVPPADVRKRKATGKK
TNARGEEEDDDDEGGADEQDEDLNKNCQLGSQYLPTTSQIMARLSERDLSFELIESILTY
IRNLQGDGAVLIFLPGWNLIFALAKHLSQHQVFGNTSQYVILPLHSQIPREDQKKVFVTP
PPGMTKVILSTNIAETSITINDVVYVIDSCKAKVKLFTSHNNMTSYATVWASRTNLEQRK
GRAGRVRPGVCFTLCSRARFDRLEEHQTAEMFRTPLHELALSIKLLRLGSIGHFLSKAPE
PPPLDAVIEAEALLRELGCLDAADSLTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTT
MAANSTTFPEIFVVEGRRRLSNHQRALAGDRASDHVAMLNAFQMWEREHAKGEEAETRWC
EWKGLQQTTMRVTSEAKYQLTNILTTAIGFPEECCMAQRWHPVGSDPTLDLVIALMCMGL
YPNVCLHQGKRKVLTTEGKPALIHKTSVNCSNQEQRFPSPLFVFGEKVRTRAISCKQTSM
VAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVAPLHLLLFASRKVEWVRKTSSNTQD
ISCKQTSMVAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVAPLHLLLFASRKVEWVR
KTSSNTQDISCKQTSMVAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVAPLHLLLFA
SRKVEWVRKTSSNTQDISCKQTSMVAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVA
PLHLLLFASRKVEWVRKTSSNTQDISCKQTSKVAPLHLLLFASRKVEWVRKTSSNTQDIS
CKQTSMVAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVAPLHLLLFASRKVEWVRKT
SSNTQDISCKQTSMVAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVAPLHLLLFASR
KVEWVRKTSSNTQDISCKQTSMVAPLHLLLFASRKVEWVRKTSSNTQDISCKQTSMVALL
HLLLFASRKVEWIDNVVRLDNWLNFDMNPRSAALVTALRPAIEKLVERAAAEPDAALQFS
PNEQKVVDCIKSLCVIEAGDYNIQRECGVPSFRPDPAKRGNRGWGTTGPRGGGFGGNQGF
GNQGFGNRGGFWGRGGFSGGNPGFEGAQGGFGGNQGGFGGNQGGFGGNQGGFGSGNGYGR
GGFGNRGFNRGGFRGRGRGRGSW
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaaatcatttctttattcttggtgcgccaagaagggacttacgccggtttac
gacattcgggctacaggtccaaagcatcgccaacgcttcctatgcgaggtccgcgtggaa
tccatcacctatgtcggcgccgggaactccacaacaaagaaggaagcccagatgaatgct
tccaaggactttgtcagctacctggtgcggaccggccaggtagctgcaaacgaggttccg
gaggacactagaactacagttaagaatgaagacgatgatcagggaaatggagatatccag
caacagcagcttatgcatgagcagcagcagcaaagatctgtttttcaggatggcatggga
ccgcaaatgatgggccaggcgtaccaagcatacggtggtcaaagccagtcttctaacttc
acatacatggaccgcatgcaacaacaaaagaacgtagaagaggctgaagacttggatgtc
aacgcaagtctccatggcaactggaccatggagaacgccaagtctaaactgcatcaattc
ttgcagattaacaagattaatactgattatatgtataaggcggtcggacccgatcatacg
aggagtttttgctgcgagatgtcgatatacgtgcgtcaacttggtcgcaacgtgaccggc
cgtgagaccgcctcgaacaagcagaccgcgagcaaatcgtgcgccttgtccatcgtgagg
cagctgtaccatctcggtgtcattgaggcctttagtgggacgctgaagaaagacaggtct
tcggaaggcataatgaagccttacccagtagcaatcagcccagaactggaacaacaatta
gaaaacacattgagagatctcgaaatccagccagtaacaatagatccttcaggtacatat
tcaagcgaggagggccaatcagggttaaccttgttacaagttgatagggtgaaagcgatg
cgggaggcgcggcctacgccgggaggcgtggtctcctggtccccgccccaggctaattgg
aatgcttggactggctgtaatattgatgaaggcccattagccactacaagcctggaagat
attagtgcggaccttgagaaacaccacagagatatgtgtcaaaacagcacactatatcag
gaaagtatccgtgaaagggaacaattaccagtttatgcgatgaggtcgcagatcatggaa
gctatcaatgagaaccccgttatcatcatcagaggcaacactggatgcggaaagactaca
caggtgtgtcaattcatcctagatgactacatagcaagtggacaaggtgcctgggccaac
atatgcgtgacacagccgcggcgtatctccgctgtgagcgtcgcggagagagtcgccagc
gagcgctgtgaggacctcgctaatagtgtcgggtattcagtccgcttcgagtcaatgctg
cccagaccgtacgggtccataatgttctgtaccgtaggagtgctgctgaggaagctggaa
ggcggcctcaggggtgtcagtcatgtactagttgatgaggtccacgaacgcgacgccgac
acagatttcgcgctaatcttgctacgtgacatggcccatacatacccggatctgcgcatc
attctcatgtcggctactgttgataccacgctgttcactacgtacttcgggaattgtcct
gttattgaggtcccaggccgcacatacccagtgcagcaatacttcttagaagactgcgta
gaactgaccaagttcgtgccgcccgccgacgtacgcaagcgcaaggccaccggcaagaag
accaacgccaggggagaggaggaggatgatgatgatgaaggtggtgccgatgaacaagat
gaagacttgaacaagaactgtcagctaggcagccagtacttgccgaccactagccaaatt
atggccaggttgtctgagagagatctaagtttcgagctaatagaaagcatattaacctac
atccggaacttacaaggcgacggggcggtactcatcttcctccctggttggaacttaata
ttcgctctcgccaaacatttgtcgcaacaccaagtgttcgggaatacgtcacagtatgtc
atactgccgttgcacagtcagatacctagggaagatcagaagaaagtttttgtgacgcct
ccaccgggtatgactaaggtgatcctatcaacgaacatagcagagacgtcgatcacgatc
aacgacgtggtgtacgtgatcgactcgtgcaaggccaaggtgaaactgttcacctcgcac
aacaacatgacctcgtacgccaccgtctgggctagcaggactaaccttgaacagcgcaaa
ggtcgtgcaggtagagtgaggccgggtgtttgcttcacgctgtgttcccgcgcccgcttc
gaccgactcgaagaacatcagactgccgagatgttccgcactcctctgcacgagttggct
ctcagtataaagctcctccggctgggcagcatcgggcacttcctgtcaaaggcgccggag
ccgccgccgctggacgcggtgatcgaggcggaggcgctgctgcgcgagctcggctgcctc
gacgccgccgacagcctcacgccgctcggcactatactcgccaagctgcctatagaaccc
cgtctcggcaaaatgatggtgctaggcttcgtcctcggcgtgggtgatgcattaacaaca
atggcggccaactccaccactttccccgagatcttcgtagtggaggggcggaggcgcctg
tccaaccaccagcgggcgctagcaggggatagggcttcggatcatgtcgctatgcttaat
gcttttcagatgtgggaaagagagcacgccaaaggcgaggaggcggagactcggtggtgc
gagtggaaggggctgcagcagactactatgagagtcacctccgaagccaagtatcagctc
actaatatcctgacaacagccatcggtttccctgaagagtgttgcatggcacagcgttgg
caccccgtggggtcagaccccacgctggacctggtgatagctctcatgtgcatggggctc
taccccaacgtgtgtctgcaccaggggaagaggaaggtgctaacaacagaaggcaagcca
gccttaatacacaagacatcagtgaactgcagcaaccaggagcagcggttcccttcgccg
ctgttcgtgttcggcgagaaggttcgcacccgcgccatcagctgcaagcagaccagcatg
gtggcgccgctacacctgctgctcttcgccagcaggaaggtcgagtgggtaaggaagacc
agctctaatacacaagacatcagctgcaagcagaccagcatggtggcgccgctacacctg
ctgctcttcgccagcaggaaggtcgagtgggtaaggaagaccagctctaatacacaagac
atcagctgcaagcagaccagcatggtggcgccgctacacctgctgctcttcgccagcagg
aaggtcgagtgggtaaggaagaccagctctaatacacaagacatcagctgcaagcagacc
agcatggtggcgccgctacacctgctgctcttcgccagcaggaaggtcgagtgggtaagg
aagaccagctctaatacacaagacatcagctgcaagcagaccagcatggtggcgccgcta
cacctgctgctcttcgccagcaggaaggtcgagtgggtaaggaagaccagctctaataca
caagacatcagctgcaagcagaccagcatggtggcgccgctacacctgctgctcttcgcc
agcaggaaggtcgagtgggtaaggaagaccagctctaatacacaagacatcagctgcaag
cagaccagcatggtggcgccgctacacctgctgctcttcgccagcaggaaggtcgagtgg
gtaaggaagaccagctctaatacacaagacatcagctgcaagcagaccagcatggtggcg
ccgctacacctactgctcttcgccagcaggaaggtcgagtgggtaaggaagaccagctct
aatacacaagacatcagctgcaagcagaccagcaaggtggcgccgctacacctgctgctc
ttcgccagcaggaaggtcgagtgggtaaggaagaccagctctaatacacaagacatcagc
tgcaagcagaccagcatggtggcgccgctacacctgctgctcttcgccagcaggaaggtc
gagtgggtaaggaagaccagctctaatacacaagacatcagctgcaagcagaccagcatg
gtggcgccgctacacctgctgctcttcgccagcaggaaggtcgagtgggtaaggaagacc
agctctaatacacaagacatcagctgcaagcagaccagcatggtggcgccgctacacctg
ctgctcttcgccagcaggaaggtcgagtgggtaaggaagaccagctctaatacacaagac
atcagctgcaagcagaccagcatggtggcgccgctacacctgctgctcttcgccagcagg
aaggtcgagtgggtaaggaagaccagctctaatacacaagacatcagctgcaagcagacc
agcatggtggcgccgctacacctgctgctcttcgccagcaggaaggtcgagtgggtaagg
aagaccagctctaatacacaagacatcagctgcaagcagaccagcatggtggcgctgcta
cacctgctgctcttcgccagcaggaaggtcgagtggatagacaacgtagtccggctagac
aactggttgaacttcgacatgaaccctcgctcggctgcgctggtgacggcgctcaggccg
gctatagagaagcttgtggagagagcggcagccgaacctgatgcagctctgcagttctcg
cccaatgaacagaaggtggtagactgcataaaatcactatgcgtcatcgaagcgggcgac
tacaatattcaacgcgaatgcggcgtcccaagcttcagacccgaccctgccaagagaggg
aaccggggatggggtaccacaggccctcgcggtgggggctttgggggaaaccagggcttc
ggcaaccaaggtttcggtaaccgaggaggcttctggggacgaggtggtttcagtggcggt
aaccccggcttcgaaggtgctcaaggtggtttcggcgggaaccagggcggttttggaggg
aaccagggtggttttggcgggaaccagggaggtttcggcagtggtaatggttacggccga
ggtggtttcggcaaccgaggttttaaccgcggaggattcagaggccggggcagaggacgc
ggaagttggtaa
DBGET
integrated database retrieval system
