Helicoverpa zea (corn earworm): 124642979
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Entry
124642979 CDS
T08400
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124642979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124642979
Spliceosome [BR:
hze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124642979
Complex C
U5 SnRNP specific factors
124642979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
124642979
NCBI-ProteinID:
XP_047037766
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All DBs
Position
2:complement(1214772..1233630)
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AA seq
976 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSDDEQSVYGQDNRDVDEDAMEEDEDGDAEPEAAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPIKHKKFQVQEQQLPETRYDMEYMA
DMLDNTNLMRNVTLMGHLHNGKTSFVDCLIRQTHPSTINTDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKNIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTLCINKIDRLILELKLPPADAYYKLRHIIDELNSMLETHQPQDNPD
EPATVFSPLLGNVCFASSLYDVCFSVESFAAMYAAAHPASGLRASDMAAWLWGDVYFNAK
TRRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLSELGIKLTKQEAKLNV
RPLLRLVCSRFFGDFCGFVEMVVRHVPSPLDAAARKVSHTYRGASGALLDDMVACDQSGR
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRIMNVGRLWIY
EARYKVELNRVPAGCWALIEGIDQPIVKTCTVVSAEEDAELHTFTPLRFNTQAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIATEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatttatatgatgagttcggtaattatatcgggccggaccttgagtcggac
tctgacgatgaacagagtgtttacggacaagataacagagacgttgacgaagatgctatg
gaggaagatgaggatggtgatgcggagcccgaggcggcgcccatgtccgtagtactacac
gaagataaacgatactatcctcaagctgtagaagtatacggcccagacgtagagacagta
gtccaagaggaagacacacaggccttggacaagcctctggttgagcctatcaagcacaag
aagttccaggtacaggaacagcagctgccggagacgaggtatgacatggagtacatggct
gatatgctggataacactaacctcatgaggaatgttacgcttatgggacatttgcacaat
ggtaaaacctcattcgtagactgtctaatcagacagacgcaccccagcactataaacaca
gacacaactataccaatgcggtacacggacacattgttcgtggagcaagaacgaggagtc
tccatcaagtctatgccagttacgttactgctcaagaatattaaaggaaaatcgcattta
ctgaacattatggacacaccgggacacgttaactttagtgacgaagttactgctgcattg
aggatttctgatggtgcggtcctattcgtggacgcagcagaaggcataatgctgaacaca
gaacgcctcctccggcacgctgtacaagaacgagtacctttgacactctgcatcaacaag
attgaccgtttgatattggagctgaagctgccgcccgcagacgcgtattacaagctgagg
catatcatcgatgagctgaactccatgttggagactcaccagcctcaggataatccggat
gaaccggctactgtgttctcgcctttgttgggcaacgtctgcttcgcgtcctctctctac
gacgtatgctttagtgtcgaatccttcgcggccatgtacgcggccgcgcaccccgcctca
gggctccgggcctccgacatggctgcctggctgtggggcgacgtgtacttcaacgcgaag
actcgaaggttcaccaagaagcagccccatgcatcagctcagaggagctttgtggaattt
atcttggagccgctgtataaaatttttgcacaggtggtaggcgacgtggacgacacatta
ccggcggtgctgtcggagttaggcatcaaactgacgaagcaggaagccaagctgaacgtc
cggccgcttctgcgactcgtctgcagcagattcttcggagatttctgcggtttcgtggag
atggtggtccgtcacgtgccgtccccgctggacgccgccgcccgcaaggtgtcgcacacg
taccgcggcgcgtcgggcgctctgctggacgacatggtggcgtgcgaccagtccggccgc
ctcgtcgcgcacaccaccaagatgtaccccaccgacgactgcaccttcttcctggtacta
gctcgtataatgtcgggcacattatacgcggggcagactgtacgagtgctgggcgaaaac
tatagcacacaagacgaggaagactcgcggatcatgaacgtgggccgactgtggatctat
gaagcccggtataaggtggaactgaaccgcgtgccagcgggttgctgggctctcatcgag
ggcatcgaccagccgatagtgaagacctgcaccgtagtgtcagctgaggaagatgctgaa
cttcataccttcactcctctgaggttcaacactcaagcggtcgtgaagattgcggtcgaa
cctgttaatccttctgagttgccgaagatgttggatggattgaggaaggtaaacaaatcg
tatcccctcttatcaactcgcgtggaagagtcaggcgagcacgtgatcctaggcaccgga
gaactgtacctcgactgtgtcatgcacgacctcaggaatatgtactccgagatcgatatc
aaagtggccgacccagtagtctcattctgcgagaccgtagtagaaacttcctcactcaag
tgcttcgccgagactcccaacaagaggaacaagctgaccatgatagctgagcccctggag
cgagggctcgccgaggacatcgaggccggagccgtctgcgtcacctgggacaggaagcgg
cttggagagttcttccagaccaaatacgactgggacttgttggcggcgcgttcgatctgg
gccttcggtccggactccacgggacccaacatcctagtggacgacactctaccctcagag
gtcgacaaacatctgctcgcttcggtcaaggatagcattgtacaaggattccaatggggc
actcgagaaggtccgctatgcgaggagccgattcgtaacgtgaagttcaagatcctagac
gcggtgatagccaccgagccgctgcacagaggcggcggacaaatcatacctactgctagg
agggtggcgtactcagcgttcctgatggcgacgccgcgtctaatggagccctatctcttc
gtagaggtgcaggcacccgctgactgcgtctccgctgtatacacagtgctggctaaacgg
agaggtcacgtaacgcaagacgcgccagtccccgggtcgccgctgtacacgatcaaggcg
ttcgtgcccgccatcgactcgttcggcttcgagaccgacctccgcacgcacacgcagggc
caggccttctgtctgcaggtcttccaccactggcagatcgtgcccggagaccccttggat
aagagtattgttattaggccactggaaccgcagcccgctacccacttggcgcgtgagttc
atgatcaagacgcgtcgccgcaaggggctcagcgaggatgtctccattaacaagttcttc
gacgaccctatgttgttggagctcgcgcgacaagacgtgcagttgaattaa
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