Intrasporangium calvum: Intca_2049
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Entry
Intca_2049 CDS
T01385
Name
(GenBank) ribonuclease H
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
ica
Intrasporangium calvum
Pathway
ica00860
Porphyrin metabolism
ica01100
Metabolic pathways
ica01240
Biosynthesis of cofactors
ica03030
DNA replication
Module
ica_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Intca_2049
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Intca_2049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_2049
Enzymes [BR:
ica01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
Intca_2049
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
Intca_2049
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
Intca_2049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_3
RNase_H
His_Phos_1
DUF7088
Motif
Other DBs
NCBI-ProteinID:
ADU48560
UniProt:
E6SCI1
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All DBs
Position
complement(2299526..2300578)
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AA seq
350 aa
AA seq
DB search
MTRTSRGGTGRDLVVEADGGSRGNPGVAGYGALVRDGASGAVLIELAEPLGLASNNVAEY
SGLLAGLRAAAEIDSAARVHVRMDSKLVVEQMSGRWKVKHEDMRRLAGEVREVLREIEAA
GGSVHFEWIPRERNKAADLLSNEAMDGQSIRRIPGAEPQDAGPTDAVDSRPEPADAPDAP
DAPDAPDAPDAPDDGADRKDLRLLLVQTPATDSAVERVARAVRTLTGTDSRVIAAPDPMA
QETGQAVAAAIGVEVEVEVSADWTADPGRAGSEPADPASSAAYGRLRLSGGTVVVVTTRR
GIVTVLAEVLGLAGDRFWSLATAPGSLTGVEVWADGSASVAFTNRTEHLA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgacccggacctcccgtggggggaccggtcgggacctcgtcgtcgaggcggacggcggg
tcccgggggaaccccggcgtggccggctacggtgcgctggtccgtgacggagcctccgga
gcggtgctcatcgagctcgccgagcccctcggtctggcgagcaacaacgtcgccgagtac
tccgggctgctcgcgggactgcgggctgcggccgagatcgacagcgctgcgcgcgtgcac
gtccggatggattccaagctcgtcgtcgagcagatgtccgggcgctggaaggtcaagcac
gaggacatgcgccgactcgccggcgaggtccgcgaggtgctccgcgagatcgaggccgcg
ggtgggagcgtccacttcgagtggatcccacgcgagcgcaacaaggccgccgacctcttg
tcgaacgaggcgatggacgggcagtcgattcgccggatcccgggcgccgagccgcaggat
gcggggccgacggacgccgtcgactcacggcccgagccggccgatgccccggatgccccg
gatgccccggatgccccggatgccccggatgccccggacgatggtgctgaccgcaaggac
ctgcgcctcctgctcgtccagactccggccaccgactctgccgtcgagagggtggcccgc
gccgtgcgaactctgaccgggacggacagccgggtcatcgccgcgccggacccgatggcg
caggagaccggccaagccgtcgccgcggcgatcggggtcgaggtcgaggtcgaggtctcg
gcggactggacagccgaccccgggagggctgggagcgagcccgccgacccagccagctca
gcggcatacggacggctgcggctgagcgggggcaccgtcgtcgtcgtgaccacccgacgc
ggcatcgttactgtcctcgcggaggtgctcgggctcgccggagaccggttctggagcctc
gcgacggcacccggcagcctcaccggcgtcgaggtctgggcggacggctcggcctcggtc
gctttcaccaaccggacggagcacctcgcctga
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