Ideonella dechloratans: LRM40_10400
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Entry
LRM40_10400 CDS
T07737
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
idc
Ideonella dechloratans
Pathway
idc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRM40_10400 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_10400 (nth)
Enzymes [BR:
idc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LRM40_10400 (nth)
DNA repair and recombination proteins [BR:
idc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRM40_10400 (nth)
Prokaryotic type
LRM40_10400 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
UFU11865
LinkDB
All DBs
Position
2235403..2236041
Genome browser
AA seq
212 aa
AA seq
DB search
MSPKKVERFFATLQAANPHPETELVYSNPFELLAAVLLSAQATDVGVNKATGPLFKVAST
PAQMLALGEEGLIGYIKTIGLYKTKAKHLIETCRILVERHGGQVPRDREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVELSLLKRVPPAYRVHAHHWVI
LHGRYVCQARKPRCGACQVADCCDYPDKTTAI
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaagaaggtcgagcgcttcttcgccacgctgcaggccgccaacccccacccc
gagaccgaactcgtctacagcaaccccttcgagctgctggcggccgtgctgctctcggcc
caggccaccgatgtgggcgtcaacaaggccaccggtccgctgttcaaggtggcgtccacc
ccggcccagatgctggccctgggcgaagaggggctgatcggctacatcaagaccatcggc
ctgtacaagaccaaggccaagcacctgatcgagacctgccgcatcctggtggaacggcac
ggtggccaggtgccccgcgaccgcgaggccctggaagccctgcccggcgtgggccgcaag
acggccaatgtggtgctgaacgtcgccttcggcgagcccaccatggcggtggacacccac
atcttccgcgtgtccaaccggaccgggctggccccgggcaagacgccgctggcggtggaa
ctttcgctgctcaagcgggtgcccccggcctaccgggtgcatgcccaccactgggtgatc
ctgcacggacgctacgtctgccaggcccgcaagccgcgctgcggggcctgccaggtggcc
gactgctgcgactacccggacaagaccacggcgatctga
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