Idiomarina sp. X4: CWC33_02720
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Entry
CWC33_02720 CDS
T05226
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
idi
Idiomarina sp. X4
Pathway
idi01501
beta-Lactam resistance
idi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC33_02720
01503 Cationic antimicrobial peptide (CAMP) resistance
CWC33_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
idi03036
]
CWC33_02720
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idi02000
]
CWC33_02720
01504 Antimicrobial resistance genes [BR:
idi01504
]
CWC33_02720
Chromosome and associated proteins [BR:
idi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CWC33_02720
Transporters [BR:
idi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWC33_02720
Antimicrobial resistance genes [BR:
idi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWC33_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
RND-MFP_C
Biotin_lipoyl
BSH_LcnD
BSH_CusB
HH_YBHG
HH_MFP_RND
Beta-barrel_RND
Motif
Other DBs
NCBI-ProteinID:
ATZ72668
LinkDB
All DBs
Position
complement(553751..554809)
Genome browser
AA seq
352 aa
AA seq
DB search
MKHFLSIAVFSLCLGAYVSAAPTQAQQFGPRETLVIVEPVQFEQEKNRVEAVGTAEAARS
ITIYPAVGDRVVAVHFEPGEVVEEGELLVELDARRQKVALEQAQINLRDAQRTVERLRSS
FERGAVPESELDNAILLRDLARVELENAKIELEDRFIRAPFEGVIGITDVEVGDRIDEQT
AIATLDDRSSLLIDFKIPEAAVSLLGEGAELKVQPWRYSGQPVTAEIVELDSRIDPQTRM
YRARARINNENDDFLPGTSFRTSISLAGQEFASIPEAALSWGVNSPFVWVVDGKNAKRVE
VQIEQRLAGRVLVSGNIQRDDLLIVEGVQSLRDGQPIKFDRTTLDGAGELSE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattttttgtcgatagctgtattcagtttgtgtttgggcgcttatgtaagtgca
gcgccaacgcaagcccaacaatttggtcctcgtgaaactttggtgattgtcgaacccgtt
caattcgaacaggaaaaaaaccgagtggaagcggtaggaacggctgaggcggcacgttct
atcactatttatccggcagtgggtgaccgggtggtcgcggtgcattttgagccaggggaa
gtagtggaagaaggtgagcttttagttgagttggatgcaagacgacaaaaagtggcactt
gagcaagcacagattaacctgcgggatgcgcagcgcaccgttgagcgtttacgctcaagc
tttgagcgcggggcagtgccagagtctgaactcgataacgcaattttactcagagatttg
gcgcgtgtagagctggaaaatgccaaaatagagttagaagatcgcttcattcgcgccccc
tttgaaggcgttattggtattaccgatgttgaggttggcgaccgcatcgatgagcaaacc
gctattgcaacgttggatgatcgttcttcgctattaattgattttaagatcccggaagcg
gcggtatcgctattaggtgaaggcgcagagctaaaggtacaaccctggcgttactcaggg
cagcctgtgactgcagaaatcgtcgaattggattcgcgaattgatccgcagactcgcatg
taccgtgcgcgcgcacgaatcaataatgaaaacgatgactttttaccaggcaccagcttc
cgcacttctatttcgctggcaggacaggagtttgcgtctattcccgaggcggcattgtcg
tggggcgttaacagtccgttcgtgtgggtcgttgacggtaaaaatgcaaaacgtgtggaa
gtgcaaattgaacagcgcttagcgggcagagtactggtttccggcaatattcagcgagac
gacttgttgattgtcgagggagtgcagagcctgcgcgacggacaacccattaagtttgat
cgcacgactctcgatggcgctggggagttaagcgaataa
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