Idiomarina sp. X4: CWC33_12430
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Entry
CWC33_12430 CDS
T05226
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
idi
Idiomarina sp. X4
Pathway
idi01501
beta-Lactam resistance
idi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC33_12430
01503 Cationic antimicrobial peptide (CAMP) resistance
CWC33_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
idi03036
]
CWC33_12430
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idi02000
]
CWC33_12430
01504 Antimicrobial resistance genes [BR:
idi01504
]
CWC33_12430
Chromosome and associated proteins [BR:
idi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CWC33_12430
Transporters [BR:
idi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWC33_12430
Antimicrobial resistance genes [BR:
idi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWC33_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
OEP
DUF5667
Motif
Other DBs
NCBI-ProteinID:
ATZ74455
LinkDB
All DBs
Position
2568825..2569976
Genome browser
AA seq
383 aa
AA seq
DB search
MKKRFQFAPLFAAGIFASAVLSGCGDAPQQGQQQQAPQVEVITVQPESLELSTQLPGRTA
AFRVAEVRPQVSGVLLERTFEEGTFVEKGQQLYQIDPATYEAELASAKAEVQRAKAVLRS
SELRYNRFQELIEENAVSQDEFDSAEATYLQNKAAVALAEAQLKNARINLEYTKVNAPIN
GIIGRSNFTEGALVTASQQEPLVTINQLDPIYVDISQSSKQFMQLQADIQSGRIEANESG
NAPVRLELNGLDFNQQGELLFSEVSVEEDTGAILLRAVFPNPDKTLYPGMFVRAAVSEGT
INTALLLPQKAVTRDPRGRPYVMLVNDKNQVEQRMITTERAIGSDWLVSSGVKEGDTIIV
SGLQKVRPGATVQITNSASNEQQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgctttcaatttgcgccgttatttgcagcgggtatttttgcttccgccgtc
cttagtggctgtggtgacgcgccgcagcaaggccagcaacagcaagctccacaggttgaa
gtgataacggttcaacctgagtctcttgaactcagcactcagttgcctggccgtaccgcc
gcgtttcgcgtcgcggaagttcgcccacaggtcagcggtgtattactagaacgcaccttt
gaagaaggtacttttgtcgaaaaaggccagcaactgtatcagattgatccagccacttat
gaagcggagttggccagtgccaaagcagaagtacagcgagcaaaagcggttttacgcagc
tcagagcttcgctataaccgttttcaggagcttatcgaagaaaatgcggtcagtcaggac
gagtttgacagtgccgaagccacttatctccaaaataaagcggcggtggcattagccgaa
gcacaacttaaaaacgctcgtattaaccttgagtacacaaaggtcaatgccccaattaac
ggtattattggtcgttcaaactttaccgaaggtgctttagtgactgcttcacagcaagaa
cctctggtcactattaatcagcttgatcctatttacgtggacattagtcaatccagcaag
caattcatgcaacttcaggctgacatccagtctggtcgaattgaagcgaatgaatcaggc
aatgcgccggttcgtttagagctgaacggtttagactttaaccagcaaggcgagctgctg
ttttcagaagtcagcgttgaggaagatactggcgccattttattaagagctgtcttccca
aacccggacaaaaccttatatcccggtatgtttgttagagccgcagtcagtgaaggtaca
atcaacacggctctcctactaccacaaaaggccgtcacccgtgatcctcgtggtcgccct
tatgtcatgctggttaacgataaaaaccaagtcgagcagcgtatgataacgaccgaacga
gccataggcagtgattggctggtcagcagcggtgttaaagaaggtgacaccattatagtg
tctggccttcaaaaagttcgtccgggcgcgacggtccaaattacaaactctgcctctaat
gaacagcagtaa
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