Isoptericola dokdonensis: I598_2655
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Entry
I598_2655 CDS
T04384
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ido
Isoptericola dokdonensis
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ido03009
]
I598_2655 (rlmC)
Enzymes [BR:
ido01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
I598_2655 (rlmC)
Ribosome biogenesis [BR:
ido03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I598_2655 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_12
Methyltransf_31
Methyltransf_23
TehB
TPMT
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ANC32185
UniProt:
A0A161I2Y9
LinkDB
All DBs
Position
complement(2837149..2838393)
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AA seq
414 aa
AA seq
DB search
MQCHHYDAGRCRSCTLLDLTHPQQVRGKEAHVRGLLALPDDVWLAPVVGDEAGFRNKAKM
VVTGTAAAPVLGILGPPGEYEGQGVDLTDCPLYPAELQAAFEPLAELIRRARLTPYDLTP
TFGPGGRRRKVTPKDAAQRGELKHVIVTLSPAGELMVRLVLRSTEPVARLRKHLPWLAGA
LPALAVLSVNVQPAHAAVLEGAEEIVLTERQTLGMELDGITLHLRPQSFFQTNTEVATAL
YRQARAWVDEVSPAALWDLYCGVGGFALHCAAPGRAVTGIEISAEAVASATTTARELATL
PPDAVVGGHDAAWWRAATADVEFAAGDAATFALGTDADPDMVIVNPPRRGIGTDLAGRLE
ASGVRHVLYSSCNAATLARDLADMPSLRPTRARLLDMFPHTDHYEVLVLLERAA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtgccaccactacgacgccggccggtgccggtcgtgcaccctcctggacctgacg
cacccgcagcaggtgcgcggcaaggaggcgcacgtccgcgggttgctggcgttgccggac
gacgtgtggctggccccggtcgtcggcgacgaggcggggttccgcaacaaggcgaagatg
gtcgtcaccggcacggcggccgcgcccgtgctggggatcctcgggccgcccggggagtac
gaggggcagggcgtcgacctcacggactgcccgctgtacccggccgagctgcaggcggcg
ttcgagccgctggcggagctgatccggcgtgcccgcctcaccccgtacgacctgacgccg
acgttcggcccggggggtcgccgtcgcaaggtgacgccgaaggacgctgcgcagcggggc
gagctcaagcacgtcatcgtcaccctctcccccgccggggagctcatggtgcgcctcgtg
ctgcgctcgaccgagccggtcgcacggctccgcaagcacctgccgtggctcgcgggcgcc
ctgcccgcgctggcggtgctcagcgtcaacgtgcagcctgcgcacgccgcggtgctggag
ggcgccgaggagatcgtcctcaccgagcggcagaccctggggatggagctcgacggcatc
accctgcacctgcgcccgcagagcttcttccagacgaacaccgaggtggcgaccgccctg
taccggcaggcgcgcgcctgggtggacgaggtctcccccgcggccctgtgggacctgtac
tgcggcgtcggcgggttcgccctgcactgcgctgcccccggccgcgcggtcacgggcatc
gagatctccgcggaggccgtcgcctcggcgaccacgacggcgcgcgagctcgccaccctg
ccgccggacgccgtcgtcggcggccacgacgccgcctggtggcgggccgccaccgccgac
gtggagttcgccgcgggggacgccgccacgttcgcgctcggcacggacgccgacccggac
atggtgatcgtcaacccgccgcgacgcggcatcggcaccgatctcgccgggcgcctggag
gcctccggcgtgcggcacgtcctgtactcgtcgtgcaacgccgccacgctggcccgcgac
ctcgccgacatgccctcgctgcgccccacccgggcccgcctgctcgacatgttcccgcac
accgaccactacgaggtcctcgtgctgctggaacgcgccgcctga
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