Idiomarina sp. PL1-037: U0358_06355
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Entry
U0358_06355 CDS
T10248
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
idp Idiomarina sp. PL1-037
Pathway
idp01501
beta-Lactam resistance
idp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0358_06355
01503 Cationic antimicrobial peptide (CAMP) resistance
U0358_06355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idp02000
]
U0358_06355
01504 Antimicrobial resistance genes [BR:
idp01504
]
U0358_06355
Transporters [BR:
idp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U0358_06355
Antimicrobial resistance genes [BR:
idp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0358_06355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WQC54171
LinkDB
All DBs
Position
complement(1365240..1368341)
Genome browser
AA seq
1033 aa
AA seq
DB search
MAKFFINRPIFAWVLALLTMMAGAIAMLQLPIAQYPTIAPPAVEIQVSYPGANAETVSNT
VTKVIEQNMTGVDNLLYFSSQSNFGSATVSLTFASGTDPDIAQVQVQNKLSQATPQLPQA
VQAQGITVSKASSSFLMVAALVASDDRYSQTDLSDYIASNIQDPIARTTGVGNVQLFGSP
YSMRIWVDPSALVNYGLTMADLKSAIRTQNAQVAAGELGGTPAVEGQRLNATIIAQTRMS
DVSEFENITLKVLSDGSQVRLKDVAEVEKGAENYSIQANYNGKPATGLAINLQTGANALE
TADAVKARMAELEEFFPDGMELVTAYDTTPFIKISISEVAQVLIEAIILVFLLMFVFLQN
LRATLIPTLAIPVVILGTMGVLALAGFSINTLTMFGMVLSIGLLVDDAIVVVENVERLMS
EEGLSPKQATIKSMGQITGALVAIGVVMAAVFAPMAFFPGATGAVYRQFSLTIITSMGLS
VLVAIVFSPALCATLLKPVKHDKNSGWGPLGWFNRTLEKWTDKYTNAIHSILRRTVRFGV
LYLGIIGILVFLFMKLPSAFLPEEDRGVFLTQMQLPVGSTLEQSVNTMDKIENYYLDQED
AVQSVFSVVGFSFSGRSQANGIAFVRLKDWSERDESQHVDAVIGRAFGFFASIKEAMIFA
FNLPPIPELGVSSGFNLFLQDRGNLGHTGLLEARNQLLGMAGQNEKLVQVRPNGLEDAPQ
LRIDIDFEKAQALGLTIASINETLSTAWGSSYVNDFIDRGRVKKVYLQGEAESRMLPEDI
NEWYVKNNQGDMVPFSSFSSWEWTYGAQRVESYNGVSAMEIQGQAAPGVSTGEAMIEMEK
MIAKLPPGIGFEWTGISLQERQSGDFAPILYSVSLIVVFLFLAALYESWSIPFSVMLVVP
LGILGAVVAVMLRGISNDVYFQVGLLTTVGVSARNAILIVEFAKDLQAQGKELLEATLEA
VRLRLRPILMTSLAFVFGVMPLALSDGAGAASRNAIGTSVIGGMIGGTVLAIFFVPLFFY
VVRRIFPPKQTEE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttttttataaatcgcccaatatttgcctgggttctcgcgttgctgaccatg
atggccggtgcaatcgcgatgctgcagctccctattgctcagtatccgaccattgcgcca
ccagcggtcgaaattcaggtaagttacccgggtgctaacgccgaaaccgtttcaaatacc
gtaaccaaagttattgaacagaatatgacaggcgtcgataacctgctctatttctcttct
cagagtaactttggcagcgctaccgtcagtctgacttttgcttccggaaccgaccctgat
attgctcaggtgcaagttcagaataaactttctcaggcgaccccccaattgcctcaggca
gttcaggctcagggaattaccgttagcaaagcgagtagctcattcttaatggtagctgcg
ctcgtcgcctcagacgaccgctactctcaaaccgatttaagtgactatatagcgtccaat
attcaggatcctatagcccgtacaaccggggttggtaacgttcaactcttcggttcaccc
tactcgatgagaatttgggtcgacccttccgcgttggttaattacggcctgacaatggcc
gacctgaaaagcgccattcggacacaaaatgctcaggtggcagccggtgaactgggcggc
acaccagccgtcgaaggtcagcgtcttaatgcgacaattatcgcacaaactcgtatgtcg
gatgtttctgagtttgaaaacatcaccttaaaagtattgtctgatggttcgcaagtccga
cttaaagacgtcgctgaagtcgaaaaaggtgcagaaaactactctattcaggccaattat
aacggtaagccggcaacaggtctggcaattaatctacaaaccggggctaacgctctggaa
acagccgatgcagtaaaagcgcgaatggctgagctggaagagtttttccctgatggaatg
gaattggttacagcatacgacaccactccttttatcaaaatttcgatttctgaagtggcg
caagttttaatagaagccattattttggtcttcctgcttatgttcgtttttcttcagaac
ctaagagccactttaatacccactttagcaataccggtggttattctgggcaccatgggc
gtactcgcgctagctggcttttcaattaacactctgaccatgttcgggatggtgctctcc
atcggcctgttagttgatgacgccatcgtcgttgtagagaacgttgagcgcttaatgtct
gaagagggcttgtcacccaagcaggcaacgattaagtcgatggggcaaattaccggagca
cttgttgctatcggtgtggttatggctgcggtatttgcacctatggccttcttcccgggt
gccaccggtgccgtttaccgacagttttcactgaccatcattacctcgatgggtctgtct
gtccttgttgctattgtgttctcaccagcattgtgtgccaccctgttaaaacctgttaag
cacgacaaaaacagtggctggggaccgcttggctggttcaaccgcaccttagagaaatgg
accgacaagtacaccaatgccatccactcaattttacgccgtactgtgcggtttggcgtt
ctttacctgggtattattggcattttggtatttttatttatgaagctaccatcggctttc
ttgcccgaagaagaccgcggtgtatttttgactcaaatgcaattaccggttggctctacg
ctcgaacagtctgtcaacaccatggataaaatagaaaactactatctcgaccaagaagat
gcggtccagtcagtattttctgttgttggtttcagtttctcagggcgcagtcaggctaat
ggtatcgcttttgtgcggctgaaagactggagtgaacgtgacgaaagccagcatgttgac
gccgttattggcagagcttttggtttctttgctagtattaaagaggcgatgatatttgcc
tttaacctgccacctattccggaactcggtgtttccagtggtttcaacctgttcctgcag
gatcgcggtaatctgggtcataccggtttgctcgaagcccgtaaccagctgttgggtatg
gcaggacagaacgaaaagctagtgcaggtccgtccaaacggacttgaagatgcaccacag
ctgcgtattgatatcgattttgaaaaagctcaggctttgggactgactattgccagtatc
aatgaaaccttaagcacagcctgggggtcatcctacgttaacgactttatcgatcggggc
cgggttaaaaaggtctatctgcagggcgaagcagaatcgcgtatgttgcctgaagatatc
aacgaatggtatgtcaaaaacaatcagggcgacatggtgccatttagctcattctcgagt
tgggagtggacctatggtgcccagcgagtcgaaagctataacggtgtttctgcaatggaa
atccaggggcaggcagccccaggagtcagtaccggcgaagccatgattgaaatggaaaag
atgattgcgaagcttcctccgggaattggtttcgaatggactggtatttctttacaagag
cgtcaatctggtgattttgcgcctattctttatagcgtatcgctgattgttgtgttcctg
ttcctggcagccctgtacgaaagctggtcaataccattttcagtcatgctggttgtcccc
ttgggtattctgggtgcagtcgttgctgtcatgcttcgcggtatctctaacgatgtttac
ttccaggtaggtctgttgacaaccgttggggtgtcggcaaggaatgccatactaatcgtt
gaatttgcgaaagacttgcaggctcagggtaaagaactactggaagccacgctggaagcc
gtgcgcttacgtctgcgccctattcttatgacgtccttagcctttgtctttggtgttatg
cctctggcgctaagcgatggtgctggcgctgcaagccgtaatgccattggtaccagtgtt
ataggcggaatgattggcggtactgtactggcgatcttcttcgtaccgttattcttctat
gttgtacggcgaatattcccgccgaaacaaacggaagaataa
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