Idiomarina sp. PL1-037: U0358_09270
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Entry
U0358_09270 CDS
T10248
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U0358_09270 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idp03400
]
U0358_09270 (nth)
Enzymes [BR:
idp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
U0358_09270 (nth)
DNA repair and recombination proteins [BR:
idp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U0358_09270 (nth)
Prokaryotic type
U0358_09270 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WQC52232
LinkDB
All DBs
Position
1982464..1983099
Genome browser
AA seq
211 aa
AA seq
DB search
MNKTKRYEILSRLRDNNPNPTTELEYDSPFQLLIAVLLSAQATDVGVNKATRKLFPVAPT
AKTMLALGVDGIKEYIKTIGLFNSKAENAYKTCKILVEEYDGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKLAPGKNVKEVEEKLIKVVPAEFKVDVHHWLI
LHGRYTCIARKPRCGSCVIEDLCEFKEKTSD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccaagcgttacgaaattttaagccggctacgggacaacaacccaaaccca
accacggaactggaatatgactcaccttttcagttattgattgcggtattgttatccgca
caggctaccgacgttggggttaataaagccactcgtaaactctttcctgtagcacccacc
gcaaaaacaatgctggctctaggtgtagatggcataaaagaatacataaaaaccatcggc
ctgtttaattccaaagccgagaacgcatacaaaacctgcaaaattctggttgaagaatat
gacggcgaagtcccggaagacagagcggcactggaagccctgcccggtgttggtcgtaaa
actgcaaacgtggtgttaaataccgccttcggctggccgactattgccgtagacacgcac
atattccgcgtgtctaaccgcactaaactggcaccggggaaaaacgtcaaagaagtagaa
gaaaagctgataaaggtggtgccggccgagtttaaagtcgatgtgcaccactggttaatt
ctgcatggccgttacacctgcatagcccgcaagccacggtgtggttcctgtgtcattgaa
gatttgtgcgagtttaaagaaaaaaccagcgattga
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