Idiomarina sp. OT37-5b: C5610_05315
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Entry
C5610_05315 CDS
T05379
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt01501
beta-Lactam resistance
idt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C5610_05315
01503 Cationic antimicrobial peptide (CAMP) resistance
C5610_05315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
idt03036
]
C5610_05315
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idt02000
]
C5610_05315
01504 Antimicrobial resistance genes [BR:
idt01504
]
C5610_05315
Chromosome and associated proteins [BR:
idt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C5610_05315
Transporters [BR:
idt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C5610_05315
Antimicrobial resistance genes [BR:
idt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C5610_05315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
HH_EMRA
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
HH_AAEA_pHBA
HH_CyaD
BSH_YknX
DUF5667
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AVJ55787
LinkDB
All DBs
Position
complement(1149111..1150268)
Genome browser
AA seq
385 aa
AA seq
DB search
MNKRFKFAPLVIAGLLSAGLLSACGDQQAAQSQQQQRPAPAVEVLEMAPQTVEVTTQLPG
RTSAYRVAQVRPQVSGVLLERKFEEGTYVEQGQQLYQIDPAVYEAELASAKAEVERAKAV
LRSSELRYKRFAELLDENAVSQDEFDSAEATFFENKAAVALAEAQLKTARINLEYTRVNA
PISGIVGRSNFTEGALVTASQAEPLVTINQLDPIYVDISQSSKAFLQLKADIASGRIEAN
PNGNAPVRLKLNGLDYSEQGELLFSEVSVDEDTGAILLRAEFPNPGNQLYPGMFVRAEVS
EGTLNKALLVPQQAVSRDPRGRPFVMVVGDNNKVEQRMIETERAIGSDWLVSSGLQQGEK
VVVAGLQNIQPGAEVRIDDSSSEQQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacggtttaaatttgctccccttgtcattgcaggcctgctcagcgcagggttg
ttgtcggcatgcggtgaccagcaagcggcgcaaagccagcaacaacagcgaccagctcct
gcggttgaggtacttgaaatggcaccacagacggttgaggtaaccacccagttacccggc
cgcacgtctgcctaccgtgtcgctcaggtgcgcccgcaagtgagtggagtgttgctcgaa
cgtaagttcgaagaaggcacttatgttgaacagggacagcagttgtatcaaattgacccg
gcagtctatgaagccgagctggccagtgccaaagccgaagttgaacgcgccaaagcggtt
ctgagaagctccgaactgcgctacaaacgttttgccgaactgctggacgaaaacgcggta
agccaggacgagtttgacagtgctgaggcgacctttttcgaaaacaaggcggccgtggcg
ctggctgaagcacagctgaaaacggctcgcattaacctcgagtacacccgggttaacgcg
cccatcagcggcattgtcggtcgttctaactttaccgaaggtgcgctggttaccgcctca
caggctgaacctctggtgaccattaaccagttggaccccatttatgtcgacatcagtcag
tccagcaaagcgtttttacagcttaaagcggatatcgcgtcgggtcgtatcgaagcgaac
ccaaatggcaacgcgccggtgcggttaaaactcaacggcctggattactcagaacagggt
gaattactgttctccgaagtgtcggtggatgaagacaccggagcgattctgctgcgcgcc
gaattcccgaacccaggtaaccagttgtaccccggcatgttcgttcgcgccgaagtcagt
gaaggtaccctgaacaaggccttattggtgccgcaacaggcggtatcgcgcgacccgcgc
ggacgtccgttcgtgatggtagtcggcgacaacaataaagtggagcaacggatgatcgaa
accgaacgcgccattggcagtgactggctggtgagcagcggtttgcagcaaggcgaaaaa
gtggttgtcgctggtctgcagaatattcaacccggtgccgaagttcgtatcgacgactct
agctcagaacagcagtaa
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