Idiomarina sp. OT37-5b: C5610_06210
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Entry
C5610_06210 CDS
T05379
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt01501
beta-Lactam resistance
idt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C5610_06210
01503 Cationic antimicrobial peptide (CAMP) resistance
C5610_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
idt03036
]
C5610_06210
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idt02000
]
C5610_06210
01504 Antimicrobial resistance genes [BR:
idt01504
]
C5610_06210
Chromosome and associated proteins [BR:
idt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C5610_06210
Transporters [BR:
idt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C5610_06210
Antimicrobial resistance genes [BR:
idt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C5610_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
Tweety
PS_Dcarbxylase
Motif
Other DBs
NCBI-ProteinID:
AVJ55939
LinkDB
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Position
1331660..1332736
Genome browser
AA seq
358 aa
AA seq
DB search
MQNFCRFLMLSAVLGTLLAAPNTAAQTKVDVIKAKRQHSIQALSVPATVNARNISDISFG
TSGRLQQFQLDVGAQVRAGDVIARLDSRQINAAIKSLEAQRDAAEATVADEQQQVAELES
LAETQFVAQSELRRARAALAVARANLAEYQALLSEREVERDYHQLRAPFSGVVAERHVDQ
GEWVNQDQVAFRLVETDEVYVDAYLAQRYLEQIDDSTEVAVRYGSDQPMAATIATKVPYL
SDNARTFLLRLTPERTEPLTVGAAVTADVAIRSKNPHLTVPQDAVIRYSDGRTSVWIARR
EDQQWLAREQLVELGERFNGWVVVRADGLSADTRVVVRGNESLTDGEVLQLTESNDYD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacttttgtcgttttctgatgctgtctgccgttctgggtaccctgctcgctgcg
cccaataccgctgcgcagaccaaggtcgatgtgataaaggctaagcgccaacacagtatc
caggcgttgtccgttcctgctaccgtcaatgcccgtaacatcagtgatatcagttttggt
accagtggccggttacagcagtttcagctcgatgtcggcgcccaggtgcgcgccggcgac
gtgatagcccgcttagacagtcggcagatcaatgccgccattaaatcattggaagctcag
cgtgacgccgccgaggccactgtggctgatgaacagcaacaagtagccgaactggagtcg
ctggccgaaactcagtttgttgctcagagtgaattacgccgcgcgcgtgctgcattggca
gtggcccgcgctaatttggccgagtaccaggcgttactgagcgagcgagaagtagagcga
gactaccatcaactgcgtgcaccgttttcgggcgtcgtggctgaacggcacgttgaccaa
ggtgaatgggtcaatcaggatcaggtcgcctttcgcttggtcgaaacggatgaagtctat
gtagacgcttaccttgcccagcgctatctcgagcaaattgatgacagcacggaagtcgct
gtgcgttacggctcggatcagcctatggctgcaaccattgcgaccaaggtcccctatttg
tcggataacgcccgtaccttcttgctccgccttacgccggagcgcactgaaccactgacc
gttggtgcggctgtcacggccgacgtggcgattcgtagtaaaaacccgcacctaactgtg
cctcaggatgcggtaatccgctacagcgacggccgtacttcggtttggattgcccgccgt
gaagaccaacaatggcttgcccgcgaacagctggttgaactcggtgaacgctttaacggc
tgggttgttgtccgcgccgacggcttgtcggctgatacccgcgtggtggtgcgcggtaat
gaatcgttaaccgacggcgaagtgctgcagctgacggagagcaacgactatgattga
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