Isorropodon fossajaponicum endosymbiont: CVFO_0343
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Entry
CVFO_0343 CDS
T07680
Symbol
nTH
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Pathway
ifo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVFO_0343 (nTH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_0343 (nTH)
Enzymes [BR:
ifo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CVFO_0343 (nTH)
DNA repair and recombination proteins [BR:
ifo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVFO_0343 (nTH)
Prokaryotic type
CVFO_0343 (nTH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBB23643
UniProt:
A0A7R6NYN5
LinkDB
All DBs
Position
complement(323588..324220)
Genome browser
AA seq
210 aa
AA seq
DB search
MNAETRTEMFGRLLKKIPSPTTELNYSTPFELLVAVTLSAQATDKSVNKVTDKLFPIANT
PEAIFELGEDTLRDTIRTIGLFNSKAKHIIQACKILIEKYSSGVPETRKELEALPGVGRK
TANVVLNTAFGHPTIAVDTHIYRVANRTAIASGKTVLEVEKKLVKFIPDEYRVPAHHLMI
LHGRYTCKARSPLCTECILLDLCEYEEKNL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgaaacacgtacagaaatgtttggaaggttgcttaaaaagatacctagtcca
accacagagttaaattattcaacaccgtttgaactactggtagctgttaccttatctgca
caagcaacggataaaagcgttaataaggttactgataaattgtttccaattgccaatacg
cctgaagctatttttgaattgggtgaagacacacttcgagacaccataagaaccattggc
ctatttaactcaaaagccaaacatattatccaagcttgtaaaattctgattgaaaaatac
agctcaggcgtaccagaaactcgtaaagaactagaagcactacctggtgttggtcgcaaa
actgccaatgttgtgcttaatactgcctttggccatccaaccattgcggtggatacgcat
atttatcgtgtagcaaaccgcactgctattgccagtggtaaaactgtattagaagtagag
aaaaaattggtcaaattcatccctgatgaataccgagtacctgcacaccacttaatgatt
ttacatggtcgttatacctgtaaggctcgctctccattatgcacagaatgtattttactt
gatctttgtgaatacgaagagaaaaacttataa
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