Ictalurus furcatus (blue catfish): 128599541
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Entry
128599541 CDS
T09387
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03272
Virion - Hepatitis viruses
ifu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128599541 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128599541 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128599541 (ldlra)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128599541 (ldlra)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
hEGF
Motif
Other DBs
NCBI-GeneID:
128599541
NCBI-ProteinID:
XP_053467216
LinkDB
All DBs
Position
2:complement(26068791..26081289)
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AA seq
867 aa
AA seq
DB search
MEKTLFLFFVIYSASPVQTEVGSCGSRNFQCGNGKCITMRWICDGTDDCGDGTDELPASC
MAKTCEPSEFHCGGRLNQCVPNSWKCDGKADCENGADEAGCSPRQCLNHEFRCSNGQCVS
QAFVCDEDADDCDDGSDEAECQPTTCNPAAFSCNNSMCLPRMWVCDGDSDCTDGSDEWPQ
NCGDQSSSPRKPCSSVDFQCGNGECIPNVWRCDGDTDCPDRSDEKDCTVSTCQPDQFRCG
DGSCIHGIRQCNQVYDCHDMSDELGCVNATHCDAPSRFQCRSGECISMDKVCDKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPSGFQLVDKKSCEDIDECANGDAC
SQICVNQVGSYKCECTEGYQVDPTTKACKAIGTVAYLFFTNRHEVRKMTLDKSEYTQVIS
RQKSIIALDMNMANKEIFWSDLSLKKIYRAPMDAALDSSQHSTVIDSGLDAAEGIAVDWI
HGNIYWTDSVRRAVSVATEDGKKRKTLFRKDLTKPRAIVVDPIKNFVYWTDWGTPAKIEK
GGLNGVDRSTLVSDNIVWPNGITLDLLNQRLYWVDSKLHTLASIDVQGGGRRTLIIDQGR
LAHPLSVTVFEEQVFWTDVSNNAILSANRVTGKDITKVAEHLTSPEDIVLYHNLKQPSAV
NWCKINNGGCEFLCLAAPQVSIFSPKYTCACPDNMMLGKDMRKCVPAVPTTAPSIQPKVP
TTGHPHITPRTIPKTSAPRTSKTSAPIITTVVKTQTTEASRAKTSPGNTHYEVTTQTNSH
GAVAAVRKESSTLLALYIALPLVVLCLLGFGGMLLWRNWKLKNTNTIHFENPVYQKTTED
KVHICKNYSSDGYSYPPRQVVSLEDEL
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagactttatttttgttcttcgtgatatattcagcgagcccagttcaaacagag
gttggatcctgtggctccaggaatttccagtgtggcaatgggaagtgtattacaatgaga
tggatatgtgatggtacggatgactgcggtgatggcactgatgagcttcctgcttcctgc
atggcaaagacatgcgaacccagtgagttccactgtgggggacggctaaaccagtgcgtg
cctaacagctggaaatgtgatggcaaggcagactgtgagaacggtgctgatgaagccggc
tgcagtccaagacagtgtctgaatcatgaattccgctgcagcaatggtcagtgtgtgtct
caggctttcgtctgtgatgaagatgctgatgactgtgacgacggcagtgatgaagcggag
tgtcagcccactacctgcaacccggctgcttttagctgcaacaactctatgtgcctgcca
cgcatgtgggtctgtgacggagattccgattgtacagacggttcagacgagtggcctcag
aactgcggcgaccagtcttcatctcccagaaagccctgctccagtgtagacttccagtgt
gggaatggggaatgtattccaaatgtctggagatgtgatggagataccgactgcccggat
cgatcagatgagaaagactgcaccgtatccacatgccagccagatcagttccgctgtggt
gatggatcatgtatccacgggatccgccagtgtaaccaggtgtatgactgtcatgatatg
agtgatgaacttggctgtgtcaatgccacccattgtgacgcaccatccaggtttcagtgt
cgcagcggtgaatgcatcagcatggacaaagtatgtgacaagcagcgtgattgtagggat
tggtctgatgagcctctgcgtgagtgtgattctaatgagtgtctgtacaacaacggtggc
tgttctcatatctgtaatgacctaaagattggctatgagtgcttgtgccccagtggattc
caattggtagacaagaaaagctgtgaagatattgatgagtgcgccaatggggacgcatgc
agtcaaatctgtgtgaatcaggtgggcagctacaagtgtgagtgtactgaaggttaccaa
gtagatccaacgaccaaagcatgcaaagctattggaactgttgcctatctattcttcact
aaccgccacgaggtgaggaagatgactctggataagagtgagtacacgcaagtcatctcc
cgtcagaaaagcataattgccttggacatgaacatggccaacaaggagatcttctggtct
gatctgtccctcaagaaaatttatagagctcccatggatgcagcattagactcatctcaa
catagcactgtgattgactctggcttggatgcagctgaggggattgcagtggactggatc
catggtaatatttactggacagatagtgtacgtcgtgccgtctctgtagctacagaagat
ggaaagaagcgcaagacgctcttcagaaaagacctgaccaagccaagagctattgtggtt
gacccaattaagaattttgtatactggactgactggggtacgcctgctaaaattgagaag
ggtggcctgaatggagttgatcgcagcactttggtgtctgataacattgtctggcctaat
gggataacgcttgatctgttgaaccagcgtctgtactgggtggactctaaactgcatacc
ctcgccagtattgacgtgcagggaggtggccgtcgtacactcattatagaccagggcaga
ctggcacatccattaagtgtcacagtgtttgaggagcaagtattctggactgatgttagc
aacaacgctatcctgagtgctaaccgtgtgacggggaaagacatcacaaaagtggcagaa
caccttacatctccagaggacattgtgctgtatcacaatctgaaacagcccagtgctgtg
aattggtgcaagatcaacaacggtggatgcgagttcctgtgcttggccgcaccacaggtc
agcatcttctcacccaagtacacatgtgcttgtcctgacaacatgatgctgggcaaagat
atgaggaaatgtgttcctgctgttccaacaacagcaccatcaatccagcccaaagttcct
accacaggccaccctcatataaccccacgcactataccaaaaacgtctgccccaagaacc
agcaagacttcagctccaatcatcaccactgtggtgaagacacaaaccacagaagcttcc
agagccaaaacctccccaggcaacactcattatgaagtgaccacacagacaaacagtcat
ggtgctgtcgctgcagtcagaaaagaatcgtcaacattgctggcactttacattgcattg
cccttggtggtgttatgcctcctgggatttggtggcatgttgctgtggaggaactggaag
ctgaaaaacaccaacaccattcattttgaaaatccagtctaccaaaagaccacagaggat
aaagttcatatctgcaagaactacagctctgatggctactcctaccctccgaggcaagtt
gtcagtcttgaagatgaattatga
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