Ictalurus furcatus (blue catfish): 128602922
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Entry
128602922 CDS
T09387
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03320
PPAR signaling pathway
ifu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128602922 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128602922 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128602922 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128602922 (nr1h3)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128602922 (nr1h3)
Nuclear receptors [BR:
ifu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
128602922 (nr1h3)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128602922
NCBI-ProteinID:
XP_053473037
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Position
27:11764659..11787554
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AA seq
446 aa
AA seq
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MMTTLSATDIADVGHGANLGCVTEEDSVSAAEVKHELHTSPSQPVSFTSSPKEPRETLHM
DPSDIKLDPSTDTPAREGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGF
FRRSVIKGAQYVCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKK
QNEEETARSSAVAAPSPAADVLPLAPEQQEMIEKLVAMQKQCNKRSFIDRRKVTPWPQSQ
DPMNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLET
SRRYNPAIESITFLTPDFSYNKDDFAKAGLQIEFINPIFEFSKGMNDLHLDEAEYALLIA
INIFSADRPNVQDHDLVEKLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVH
SEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccctttctgcgactgatattgctgatgttggtcatggggcgaatctgggg
tgtgtcactgaggaggactcagtgagtgcagcagaagtgaaacatgagttacacacttct
cccagtcaaccagtttcattcaccagttctcctaaagagccgagagagacgctgcacatg
gaccccagcgacatcaaactggatccctctacagacacacctgcaagagaggggcagcca
gtgaagaggaagaagggtccagctcccaagatgctggggaacgaggtgtgtagtgtgtgt
ggagacaaggcctctggtttccactacaatgtactgagctgtgagggctgtaagggcttc
ttcaggcgcagcgtgatcaaaggagcgcagtacgtctgcaagaactcgggccgctgtgag
atggacatgtacatgcgccgaaagtgtcagcagtgtcggctgcgcaagtgtcgggaggcg
ggcatgcttgagcagtgtgtgctttcggaggagcagattcggttgaagaaaatgaagaag
cagaacgaggaagagacagctcgtagctcagccgtggctgcaccgagcccagcggctgac
gttctccctttggctccagaacagcaggaaatgatcgagaagttagtcgccatgcagaaa
cagtgcaacaaacgctccttcatcgaccggcgcaaagtcactccatggccgcagagtcag
gaccccatgaaccgggaagtgcggcagcagcgctttgctcacttcaccgagctggcaatc
atgtcggtgcaggagatcgtggactttgctaaacagctgcctggtttcctggagctcacc
cgtgaggaccagattgccctgctcaagacctccaccattgagatcatgctgctagagacg
tctcgccgctacaatccagcgatcgagagcatcactttcctcacgccagacttcagctac
aataaggatgactttgccaaagcagggctgcagatcgagttcattaaccccatctttgag
ttctcaaagggcatgaatgacttgcacctggatgaggcagagtatgccctgcttatcgct
ataaacatcttttcagcagaccgacccaacgtgcaggatcatgatttggtggagaagctc
caacagccgtatgtggatgctctgcattcgtacatcaggatcaagagaccaaatgatcac
ctgatgttcccacgtatgctgatgaagctggtcagcctgcgcaccctgagtagtgttcac
tctgagcaggtcttcgctctgcgactgcaggacaagaaacttccccctcttctgtctgaa
atctgggatgtccatgaatga
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