Ictalurus furcatus (blue catfish): 128603046 Help Entry 128603046         CDS       T09387                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ifu  Ictalurus furcatus (blue catfish) Pathway ifu04010   MAPK signaling pathway ifu04120   Ubiquitin mediated proteolysis ifu04140   Autophagy - animal ifu04144   Endocytosis ifu04620   Toll-like receptor signaling pathway ifu04621   NOD-like receptor signaling pathway ifu04622   RIG-I-like receptor signaling pathway ifu05132   Salmonella infection ifu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ifu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     128603046 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     128603046 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     128603046 (traf6)    04140 Autophagy - animal     128603046 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     128603046 (traf6)    04621 NOD-like receptor signaling pathway     128603046 (traf6)    04622 RIG-I-like receptor signaling pathway     128603046 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     128603046 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     128603046 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ifu04131]     128603046 (traf6)    04121 Ubiquitin system [BR:ifu04121]     128603046 (traf6) Enzymes [BR:ifu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      128603046 (traf6) Membrane trafficking [BR:ifu04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     128603046 (traf6) Ubiquitin system [BR:ifu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     128603046 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX TRAF6_Z2 zf-C3HC4_4 zf-RING_5 TRAF3_RING U-box RING_XB3-XBAT31 SlyX Sina_ZnF DUF7310 Spc29 HAP1_N DUF4472 zf-RING_11 zf-TRAF_2 DM zf_UBZ ATG16 DUF3450 Motif Other DBs NCBI-GeneID:  128603046 NCBI-ProteinID:  XP_053473207 LinkDB All DBs Position 27:9946150..9957547 Genome browser AA seq 540 aa AA seqDB search MACGDMHKSNPDEYPFSRCMAEMEKERESYLSPTENPSTISVSSGTQAEQQGYDVDFDPP LESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLTEDQLFPDNFA KREILSLTVRCRNFGCNEKMELRHFENHLKLCEFATVPCLQCNEPVWKNSIEEHMNQECL QRLITCPDCAENIIYANKQFHEQMCPFVNTVCEYCNMEFIRGQLSSHCATDCLKAPVACT FSMFGCQEKMARNDLALHMQEFTQMHMRYMAEFLKNQTMNGIPPAPTCGPSCSSPSEHGA SARVGEPCQCSQDMQQLRETVVELEGRLVRQDHQIRELSIRNDTQHTQLTELRKKLASLE EKMHELEAQQYQGVYVWRIEGFSAHLHQQEAGQPVVLHSPPFYTGRPGYKLCLRLHLQTP SAPRCSNYISLFVHTMQGEFDSQLPWPLQGTIRLAVLDQAECQHHVEIMETKPDLQAFQR PTVLRNPKGFGYVTFMQLQALRQRGFVKDDVLLVRCEVMPRFDTSLRREGMQPRGPEPSL NT seq 1623 nt NT seq  +upstreamnt  +downstreamnt atggcgtgtggtgacatgcataaatccaatcctgatgagtatccattctccagatgtatg gctgaaatggagaaggagagggagtcatacttaagccctacagaaaacccatccacaatt agtgtctcatccggcacccaagcagaacagcaaggctacgatgttgactttgaccctcca ctggagagcaaatacgagtgtcccatctgcctgatgggtctaaggtcagctgtgcagaca ccatgtggccatcgcttctgcaacagctgtattaaaaagtccatcagggacacggggcag aaatgtccagttgacaatgaagtgctgacagaggaccaactttttccagataactttgcc aagagggaaatcctctctctcactgtgcgctgccgcaattttggctgtaatgagaaaatg gagctcagacattttgagaatcacttgaagctctgtgaatttgccacagtgccctgccta cagtgtaatgagcctgtatggaagaatagtatagaggaacatatgaaccaggagtgttta cagcgcctgatcacatgccctgactgtgcagagaatatcatctatgctaacaaacagttt catgagcagatgtgtcccttcgtgaatacagtgtgtgagtactgtaacatggagttcatt cggggtcagttgtcatcacactgtgccacagactgcctgaaagctcctgttgcctgtact ttcagcatgtttggttgtcaagaaaagatggcaaggaacgacctggcccttcacatgcag gagttcactcagatgcacatgcgctacatggccgagttcctgaagaaccagactatgaac ggcattcctccagctccaacatgtggcccttcgtgttcttccccatctgagcatggtgcc tctgccagggtgggagagccatgccagtgcagccaggacatgcagcagctacgtgagact gttgtggaactcgagggccgcctcgtgcgccaggaccaccaaatacgggagctgagcatt cgcaatgatacacagcatacgcagctaacggagctacgcaagaagctggcgtcgctggaa gagaaaatgcacgagctggaagctcagcagtaccagggtgtctatgtttggcgaatcgag ggattctcagctcacctgcaccaacaagaggccggacaaccagttgtgctccatagccca ccattctacacgggtagaccgggctataagctgtgcctgcgactgcacctgcagacacca agcgcaccacgttgctctaactacatctcgctgtttgtgcatacaatgcagggtgagttt gacagccagctcccatggcccctgcagggcaccatccggctggctgtgctggaccaggct gaatgccaacaccatgttgagataatggagaccaaaccagacctacaggccttccagagg cccacagtgctgcgcaaccccaaaggctttggctatgtcaccttcatgcagctgcaggcg ctgcgccagcgaggctttgtcaaggacgacgtgctgctggtgcgctgtgaggtcatgcca cgtttcgacaccagtctcaggagagagggcatgcaacctcgaggacctgaaccatccctc tga

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