Ictalurus furcatus (blue catfish): 128605349
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Entry
128605349 CDS
T09387
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00900
Terpenoid backbone biosynthesis
ifu01100
Metabolic pathways
Module
ifu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128605349 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ifu01006
]
128605349 (ggps1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
128605349 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
128605349 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
128605349 (ggps1)
Prenyltransferases [BR:
ifu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
128605349 (ggps1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
128605349
NCBI-ProteinID:
XP_053476670
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All DBs
Position
3:9549093..9575651
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AA seq
298 aa
AA seq
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MDNLEGKATERILLEPYNYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLEHPEAVHVFTCQL
LELHRGQGLDIHWRDTYTCPSEAEYCGMVLRKTGGLFGLAVGLMQLFSEWRCDLKPLLDT
LGLLFQIRDDYANLCSREYGANKSFCEDLTEGKFSFPTIHAIRTQLHSTQVQNILRQRTE
DEDVKRYCVDYLEKVGSFAYTRQKLHELEKEAYRLIAELGGNPELEGLIEHLSHIYKE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcttgagggaaaagctaccgaaaggattctactagaaccatacaattacctg
ctgcagctgccagggaaacaagtccgaactaaactgtcccaagctttcaatcactggctc
aatgtacctgaggataaacttcaggtaatcattgaggtaacagaaatgttgcacaatgcc
agtctcttaatcgatgacatcgaggacagctccaagttgcggcgtggtttccctgtagct
cacagcatctatggcgtgccatccgttataaactctgcaaactatgtctacttcctgggc
ctagagaaggtgctgacgctggaacaccctgaggctgtgcacgtgttcacttgccagctc
ctggagctgcaccgtgggcagggcctggatatccattggcgtgacacctacacttgccca
agtgaagcagagtactgtggaatggtactgcgtaagactggcggattattcggcctagca
gtgggcctcatgcagctcttctcagaatggcgctgtgacctgaagcctctactagacaca
ctcgggctcttgttccagatacgtgacgactatgccaatctctgctcacgtgaatatggt
gcaaacaagagcttctgtgaagacctgacagagggcaaattctcctttcccaccattcac
gccatccgtacacagctccatagcacacaggtgcagaacatcctacgtcagcgcactgaa
gatgaagatgttaagcgttactgtgtggattatttggagaaggtgggctcctttgcgtac
accaggcagaagttgcatgagctagagaaagaggcatacaggctgattgcagaattaggg
gggaacccagagctggagggacttatagaacatctcagccacatttacaaggaatga
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