Entry |
|
Symbol |
trpc6b
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Name |
(RefSeq) short transient receptor potential channel 6
|
KO |
K04969 | transient receptor potential cation channel subfamily C member 6 |
|
Organism |
ifu Ictalurus furcatus (blue catfish)
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Brite |
KEGG Orthology (KO) [BR:ifu00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:ifu04040]
128606968 (trpc6b)
Ion channels [BR:ifu04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128606968 (trpc6b)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
4:29605908..29617551
|
AA seq |
817 aa
MLAKSRRLAMRRPAYMFSAHSNSLSLAEELFLEAAEYGNIPVVRKMLEELPELNINCVDY
MGQNALQLAVANEHLEVTELLLKKDNLARIGDALLLAISKGYIRIVEAILAHQAFADTSK
LTNSTLQAEINDDFFAYDDDGMRFSQDITPIILASHCHEYEIVHILLLKGARIERPHDYF
CKCNTCVYHQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAVLANIEK
EFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDTELNGHDKTGRPSLIRLKLAIKY
ELKKFVAHPNCQQQLLSIWYENLSGLRQQTTAVKLLVVFGVAVGLPILALLYWIAPSSKL
GKIIRGPFLKFVAHAASFTIFLGLLIMNAADRFEGTTLLPNMTIHDHPTQLFRMKTTPFT
WMEMLIISWVIGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVSSFIARFMAFWHAY
TAQSYVDEHYTDLSNITLPYEVEYYRLARIYWVPSDPQLISEGLYAIAVVLSFSRIAYIL
PANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMFGMFNLYSYYLGAKQNNAFTTVEES
FKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVIMVIVLLNMLIAMINSSFQEI
EDDADVEWKFARAKLWFSYFEEGGTLPVPFNLIPSPKSVLSLTQKIKQLLLTPLHRHKDS
LKEDTELNELGEQKESNYAGSPRSSRYRRIMKRLIKRYIIKAQMDKESDEVNEGELKEIK
QDISSLRYELLEKSNETEELAEMIRALAETLSRQHSN |
NT seq |
2454 nt +upstreamnt +downstreamnt
atgctggctaagagtcgtcgcttggctatgcgccgtccagcatatatgtttagcgctcac
agcaacagcctgtcacttgctgaagagctattccttgaggcagctgaatacggaaacatc
cctgttgtccgaaaaatgctggaggaactgcctgaacttaatatcaactgtgtggactat
atggggcagaacgcattacagctagcggtggccaatgagcacttggaggtgacggagcta
ctgctgaagaaagacaacctggccaggattggtgatgctctgcttctagccatcagcaaa
ggctacatccgaatagtggaggccatattggctcaccaggcctttgctgacacatcaaag
ctaaccaacagcaccctgcaagctgaaataaatgatgacttctttgcctacgatgatgac
ggcatgcgtttttcacaagacattacacccattatcttggcctctcactgccatgagtat
gaaattgtacacatcctgttactgaagggagctcgcattgagcggccacacgactacttc
tgtaaatgtaacacctgcgtctaccaccagaggcacgattccttcagtcactctcgttcc
cgtatcaatgcctacaaggggctggccagcccggcctacctctcgctctccagtgaagac
cctgtgctgactgcgctggagctaagcaatgagctggctgtgctggccaacatagagaaa
gagttcaagaacgattataagaagctgtctatgcaatgcaaagacttcgtggttggactt
ttggacttgtgccggaacacagaagaggtggaagccatattgaatggagacacagagtta
aacggccacgacaaaacaggcagaccgagtctcattcgtctaaaactggccatcaaatat
gagcttaaaaagtttgtagctcatccaaactgtcagcagcagctcctctccatttggtat
gaaaatctgtctgggctccggcagcagactacggctgtgaagttgctagtggtgttcggc
gtggctgttggactgccaatcttggctctgctatactggatagcaccatcaagcaagtta
gggaagatcatccgtggtcctttcctcaagtttgtggcccatgcagcttcattcaccatc
ttccttggtctcctgattatgaatgcagcagatcggtttgagggaacgactctccttcca
aacatgaccatccatgaccatcctacacagctgttccgcatgaaaaccacccctttcacc
tggatggagatgctgatcatctcctgggtcataggaatgatttgggctgaatgcaaggag
atctggtctcaaggccctcgggagtatctgttggaaccctggaacctgttggactttggg
atgctggccatctttgtatcatcattcattgcaagattcatggctttctggcacgcgtac
actgcacagagttatgttgatgagcactacacggacctctctaacataacattgccctac
gaggttgagtattatcgcttagcacgcatctattgggtgccctctgacccccagctgatc
tcagagggtctgtatgcgattgctgtagtgctgagcttctcgcggatcgcctacatcctg
ccagccaatgagagctttggccccctgcagatctccttgggcagaactgtcaaagacatc
tttaagttcatggtgatcttcataatggtgtttgtggcctttatgtttggcatgtttaac
ctctactcctactacctcggagcaaagcaaaacaatgccttcacaactgtcgaagagagc
tttaaaacgttgttctgggctatttttggactttccgaggtcaaatcagttgtcattaat
aatggacataaattcatcgaaaatattggctatgtcctttatggagtttacaatgttatc
atggttatcgtcctcctcaacatgctcatcgctatgatcaacagctcgtttcaggaaatt
gaggatgatgcagatgtggagtggaagtttgcccgggctaagctgtggttctcctacttt
gaggaaggtggaactttgcctgtaccttttaacttaattcccagccccaagtctgtgctc
agcctgactcagaaaatcaagcagctcttgttaacacctctgcacagacacaaggacagc
ctgaaggaggacacagagctcaatgaactgggtgaacaaaaagaatcaaattatgcagga
tcacctcgatcaagtcgttatcggaggatcatgaaacgattaatcaaaagatatatcata
aaagcgcagatggacaaagagagtgatgaggtaaatgaaggggagctaaaggagataaag
caggacatctcaagtttgcgctacgagctcttggagaagtctaatgagacagaagaattg
gcagagatgatcagggcattggcagaaacattgagcaggcagcacagtaactag |