KEGG   Ictalurus furcatus (blue catfish): 128607327
Entry
128607327         CDS       T09387                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain
  KO
K06752  MHC class II antigen
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04145  Phagosome
ifu04514  Cell adhesion molecules
ifu04672  Intestinal immune network for IgA production
ifu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128607327
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128607327
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128607327
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128607327
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128607327
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128607327
  Exosomal proteins of epithelial cells
   128607327
  Exosomal proteins of breast milk
   128607327
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 Ig_2 C2-set_3 ig
Other DBs
NCBI-GeneID: 128607327
NCBI-ProteinID: XP_053480037
LinkDB
Position
5:1292924..1295812
AA seq 249 aa
MSKLLKILLILLPAVLHTANGHSLAEPFWCIWSKEDLSDMELIESYIINKVNYLEYNSTL
GKYVGYTELGIKNADRLNNDPAVLQTRKAEMDSFCKNNVGNYYNNILSKTVEPQVKVKLV
KKSDGTHPATLMCSAYRFYPPAISVTWLRNGKEIKGGVTSTEEMADGDWYYQVHSHLEYM
PESGEEISCVVQHASFTKPMNYKWDPSMPEPDKSKIAIGASGLVLGIVLSAAGFIYYKKK
SSGRILVPT
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtccaagctgctgaagattctcctcatcttactgcctgcagtcctgcacacagcaaat
ggacattccctggcagagcccttttggtgcatctggagtaaagaggatctcagtgacatg
gagctcatagagtcttacatcatcaataaggttaactacctagagtataacagcactctg
gggaagtatgtgggatacactgagttaggcatcaaaaacgcagacagattaaacaatgac
cctgcagtgctgcaaacacgaaaagccgaaatggactctttctgtaagaataatgttggg
aattactacaacaacatcctcagtaaaacagttgagccccaggttaaagtgaagttggtg
aagaagtcagacggcactcacccggccacactgatgtgcagcgcttacagattttaccct
ccagccatctcagtgacctggctgaggaacgggaaggagattaagggaggtgtgacgtcc
actgaggagatggctgatggagactggtactatcaggtccactcccatctggagtacatg
cctgaatctggagaggagatctcctgtgtggtccaacacgccagcttcaccaaacccatg
aactataagtgggacccctcgatgcctgaacctgataagagtaagattgctatcggggct
tcagggctggtgttggggatcgtgctttcagctgctggattcatctactacaagaagaaa
tcctcaggacggatcctggtgccgacataa

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