Ictalurus furcatus (blue catfish): 128608038
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Entry
128608038 CDS
T09387
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03250
Viral life cycle - HIV-1
ifu03260
Virion - Human immunodeficiency virus
ifu04060
Cytokine-cytokine receptor interaction
ifu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128608038 (cd4-1)
03260 Virion - Human immunodeficiency virus
128608038 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128608038 (cd4-1)
04514 Cell adhesion molecules
128608038 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ifu04090
]
128608038 (cd4-1)
CD molecules [BR:
ifu04090
]
Proteins
128608038 (cd4-1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
Ig_2
V-set_CD47
TM_ErbB1
Ig_4
Orf78
Protocadherin
EphA2_TM
ECSCR
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
128608038
NCBI-ProteinID:
XP_053481390
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All DBs
Position
1:complement(11517192..11541940)
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AA seq
479 aa
AA seq
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MKAMKSLSLSLSLSLSLSLSLSLSLSDEPKGIFAQIGNSVTLPRRIWGIEGKIHVNWHFQ
DNLLISRNPTTSTSKTVHNRFSLSSDSSLIISNVEKSDFGIFKCEQHYLVDTITDTYKLY
EVMMSTPPPLLVGTSLDLSCEIDNEGFKLVHEIKWLGPDNTSYIGSSSSNKRTLRVTKVS
SIHSGKWTCAVRYGASITLKARTDVIIVDLASSPPDPIYTSDSSINFPIPCSLSSIIPWS
TVNATGVTGGSWHFTPLKSSESSLPLLKLQLNPSPAWKFLSDTHNSLMETDLKNHELSVK
ISKVSLNNRGNYTCSLEFGSRTLSRSVQVEVLQVISSEGKVIYEGNTVNLTCTLGHHMTP
DLEVNWIPPYGSSLSNLSPPHTTMLSIPGVSVKDSGRWTCQLKKNATLLTSATISLKIEK
APVNIWLVVAIVGGLLVFILIAVITVFIIRRHRQMMRYRCRKRRVCCCKNPKPKGFYKT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatgaaatctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctctcagatgaaccaaaggggatttttgcacagatcggaaactctgtt
actcttcccaggaggatatgggggatagaaggcaaaattcatgtcaactggcacttccag
gataacttactaattagtaggaaccctacaacatccacttcaaaaacagtgcacaaccga
ttctctctttcatcagactcatctcttatcatttctaatgttgaaaagtctgactttgga
attttcaaatgtgaacagcattaccttgtggatactattacagacacatataaactttat
gaagtaatgatgtctacaccgccaccactgctggttggtaccagtctcgatctgtcctgt
gaaattgataatgaaggatttaaacttgttcatgagataaaatggttagggcctgataat
acatcgtatatcggatcatcttcttcgaacaaacgcactctcagggtgaccaaagtctcc
agcattcacagtggaaagtggacctgtgcagtgcggtatggtgctagcatcacattaaag
gccagaacagatgtcatcattgtagatctcgcctcctctccaccggatcccatctataca
tctgactcctccattaatttccctatcccttgttccttatcctcaataattccctggtcc
acagtgaatgccacaggtgtgacgggaggtagctggcatttcactccacttaaatcttct
gaatcctcactccctctcctcaaattacaactcaatccctcccctgcctggaagttcctc
agtgacacacacaactcgctcatggagactgatttgaaaaatcatgaactcagtgtgaag
atttccaaggtgtctttaaataacagggggaactacacctgcagtcttgagttcgggtca
agaacactcagcaggagcgtgcaggtagaggtgctgcaagttatttcttcagaaggtaaa
gttatatatgagggtaacacagtgaacttgacctgcacgctgggtcatcacatgacccct
gacctggaagtgaactggatacctccctatggttcatctttgtcaaatctcagccctcct
cataccacaatgctgtctatccctggagtaagtgtgaaggacagcgggcgatggacatgt
caactcaaaaagaatgcaacattgcttacatcagctacaatcagtttgaaaatagagaaa
gctccagtgaatatttggcttgttgtagctattgttggtggtcttctggtcttcatcttg
attgctgtaataactgtcttcatcattcgtaggcacagacagatgatgaggtatagatgc
cgtaagaggagagtctgctgctgtaagaatcccaagcccaaaggtttctacaagacctga
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