KEGG   Ictalurus furcatus (blue catfish): 128608038
Entry
128608038         CDS       T09387                                 
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule isoform X1
  KO
K06454  T-cell surface glycoprotein CD4
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03250  Viral life cycle - HIV-1
ifu03260  Virion - Human immunodeficiency virus
ifu04060  Cytokine-cytokine receptor interaction
ifu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128608038 (cd4-1)
   03260 Virion - Human immunodeficiency virus
    128608038 (cd4-1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    128608038 (cd4-1)
   04514 Cell adhesion molecules
    128608038 (cd4-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ifu04090]
    128608038 (cd4-1)
CD molecules [BR:ifu04090]
 Proteins
  128608038 (cd4-1)
SSDB
Motif
Pfam: Ig_3 I-set ig V-set Ig_2 V-set_CD47 TM_ErbB1 Ig_4 Orf78 Protocadherin EphA2_TM ECSCR Trp_oprn_chp
Other DBs
NCBI-GeneID: 128608038
NCBI-ProteinID: XP_053481390
LinkDB
Position
1:complement(11517192..11541940)
AA seq 479 aa
MKAMKSLSLSLSLSLSLSLSLSLSLSDEPKGIFAQIGNSVTLPRRIWGIEGKIHVNWHFQ
DNLLISRNPTTSTSKTVHNRFSLSSDSSLIISNVEKSDFGIFKCEQHYLVDTITDTYKLY
EVMMSTPPPLLVGTSLDLSCEIDNEGFKLVHEIKWLGPDNTSYIGSSSSNKRTLRVTKVS
SIHSGKWTCAVRYGASITLKARTDVIIVDLASSPPDPIYTSDSSINFPIPCSLSSIIPWS
TVNATGVTGGSWHFTPLKSSESSLPLLKLQLNPSPAWKFLSDTHNSLMETDLKNHELSVK
ISKVSLNNRGNYTCSLEFGSRTLSRSVQVEVLQVISSEGKVIYEGNTVNLTCTLGHHMTP
DLEVNWIPPYGSSLSNLSPPHTTMLSIPGVSVKDSGRWTCQLKKNATLLTSATISLKIEK
APVNIWLVVAIVGGLLVFILIAVITVFIIRRHRQMMRYRCRKRRVCCCKNPKPKGFYKT
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaaagctatgaaatctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctctcagatgaaccaaaggggatttttgcacagatcggaaactctgtt
actcttcccaggaggatatgggggatagaaggcaaaattcatgtcaactggcacttccag
gataacttactaattagtaggaaccctacaacatccacttcaaaaacagtgcacaaccga
ttctctctttcatcagactcatctcttatcatttctaatgttgaaaagtctgactttgga
attttcaaatgtgaacagcattaccttgtggatactattacagacacatataaactttat
gaagtaatgatgtctacaccgccaccactgctggttggtaccagtctcgatctgtcctgt
gaaattgataatgaaggatttaaacttgttcatgagataaaatggttagggcctgataat
acatcgtatatcggatcatcttcttcgaacaaacgcactctcagggtgaccaaagtctcc
agcattcacagtggaaagtggacctgtgcagtgcggtatggtgctagcatcacattaaag
gccagaacagatgtcatcattgtagatctcgcctcctctccaccggatcccatctataca
tctgactcctccattaatttccctatcccttgttccttatcctcaataattccctggtcc
acagtgaatgccacaggtgtgacgggaggtagctggcatttcactccacttaaatcttct
gaatcctcactccctctcctcaaattacaactcaatccctcccctgcctggaagttcctc
agtgacacacacaactcgctcatggagactgatttgaaaaatcatgaactcagtgtgaag
atttccaaggtgtctttaaataacagggggaactacacctgcagtcttgagttcgggtca
agaacactcagcaggagcgtgcaggtagaggtgctgcaagttatttcttcagaaggtaaa
gttatatatgagggtaacacagtgaacttgacctgcacgctgggtcatcacatgacccct
gacctggaagtgaactggatacctccctatggttcatctttgtcaaatctcagccctcct
cataccacaatgctgtctatccctggagtaagtgtgaaggacagcgggcgatggacatgt
caactcaaaaagaatgcaacattgcttacatcagctacaatcagtttgaaaatagagaaa
gctccagtgaatatttggcttgttgtagctattgttggtggtcttctggtcttcatcttg
attgctgtaataactgtcttcatcattcgtaggcacagacagatgatgaggtatagatgc
cgtaagaggagagtctgctgctgtaagaatcccaagcccaaaggtttctacaagacctga

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