Ictalurus furcatus (blue catfish): 128608878
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Entry
128608878 CDS
T09387
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04081
Hormone signaling
ifu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
128608878 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128608878 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128608878 (rapgef4a)
Membrane trafficking [BR:
ifu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128608878 (rapgef4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
RA_3
Motif
Other DBs
NCBI-GeneID:
128608878
NCBI-ProteinID:
XP_053483008
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All DBs
Position
6:20478806..20521569
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AA seq
1014 aa
AA seq
DB search
MISPKMVAAHTSAHSSASAEWIACLDKRPEERSGEDVDIIMARLKRVKAFEKFHPTMLQQ
ICLCGFYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESVLDNTPRHATIVTREFSELLRIEQREFRSLWEKYRQCMAGLLAPPYGAMESGPSADRM
PDKENLGNSLGSMTRHLNKVPSEKIMRAGKVLRNAILTQAPHMIRDRKYHLKTYKRCCVG
TELVDWQMQQSSCVHTRVQAVGMWQVLLEEGVLNHVDQELNFQDKYLFYRFLDDEQDDAP
LPSEEEKKESEEELQDTLLFLSQMGPDAHMRMILRKQPGQRTVDDLEIIYEELLHIKALS
HLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEG
DDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEADVLVLE
KSSVRSSSHAGSSPLKYTVMSGTPEKILEHFLETMKLDSKYTESGTFITNPALDDFVLMH
CVFIPNKQLCPLLMAHYQAQASQGSDQERLDYALNNKRRVIRLVLQWAAINTPHLQEEES
SLAFLQDFYVSVSEDAKLIPALKDQLPELESVLKQNSDDANPSQKKHKVLLRQFSMGDEK
LQKRQPIKSTDEILFKVYCSDHTYTTIRVPVSASVREVVSAVSDKLGSQDDLLVVHLSSA
GDKVVLKPNEVSIFSSLSINGRLFVCSREQINSLTPLPEQEGPSAGSMSTLELMSSKEVA
YQMTLYEWELFNCVHEHELIYHTFGRQHFKKATANLDLFLRRFNEIQLWVVTEVCLCSTL
SKRVQLLKKFIKIAAHCKEFRNLNSFFAIIMGLSNPAVSRLSQTWEKLPSKFKKVYAEYE
NLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTFVDSLVNFEKMRMIANT
VRIIRYCRSQPFNHEAPQATKNHQDVRLYVRQISVIDNQRTLSQLSHKLEPRRP
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatctctccaaagatggtagcagctcacacctctgctcattcctccgcatctgcagaa
tggatagcctgtctcgacaagcgaccagaggagcgctctggggaagacgtggacatcatc
atggcccgtctgaagcgcgtgaaagcttttgagaagttccaccccaccatgctacagcag
atctgtctatgtggcttctatgagtgcctggaaaaaggaatcacattgtacagacagggt
gatatcggcactagttggtacgctgtcctttctggctcgcttgatgttaaagtctctgaa
acggccaaccatcaggatgcagttaccatttgcacactgggcatcggcacagcatttggg
gagtccgttttggacaatacaccgcgtcacgccacgattgtaacccgagaattcagtgag
ctgctgcgcatcgagcagagggagttcagaagcttgtgggagaaatatcgtcagtgcatg
gctggtctcctggcccctccctatggtgcaatggagagtgggcccagtgctgacagaatg
cctgacaaagagaatctgggtaactccctaggatcaatgaccagacacctgaataaggtt
ccatctgagaagatcatgcgtgcaggtaaagtgctaaggaacgccatcctcacccaagca
cctcacatgattcgagacaggaagtaccacctaaagacttacaagcggtgttgtgtaggc
acagagctggttgactggcagatgcagcagagttcctgtgtacacacacgggttcaggct
gttgggatgtggcaggtgttgctggaggaaggagtactcaaccacgttgatcaggagctg
aatttccaggataagtacctgttctatcgcttcctggatgatgagcaggatgatgcgcca
ctcccaagtgaagaggaaaagaaagagagtgaggaggaactgcaggacaccctcctcttc
ctgtctcagatgggccctgacgcccacatgcgcatgatccttcgaaaacagcctggccaa
aggacagtagatgatttagagattatttatgaggaactgctacatataaaagccttatct
cacctttctacaacagttaaaagggagttagcaggcgtcctcatttttgagtcccatgca
aaagcaggaacagtattgtttaatcagggagaggaaggaacctcgtggtacatcatccta
aagggttcagttaatgtggttatttatggcaagggtgtggtttgcacactgcatgagggg
gatgattttgggaaacttgctctggtaaatgatgcaccgcgtgcagcctccatcgtcctg
cgagaggacaactgccacttcctgagggtggacaaagaggattttaacaggatcctcagg
gatgtagaggcaaatacagtgcgtttgaaggaacatgaagcagatgttttagttcttgaa
aagagcagcgtcagaagctccagccatgcaggctcctcaccactcaaatacactgtgatg
tccggaactccagagaagattctcgaacacttcctagagaccatgaaactcgattccaaa
tatacagagtcaggtactttcatcacaaatccagcgttggatgactttgtgcttatgcac
tgtgtatttatacccaataagcaactgtgtccactcctcatggcccactaccaggcgcag
gcgtctcaaggcagtgatcaggagaggctggactatgctctgaacaacaagcgcagagtc
attcgtctggtgctgcagtgggctgccattaacaccccccacctgcaggaggaggagagc
tctctggccttcctccaggatttttacgtgtcagtatctgaagatgccaaacttattcct
gcactcaaagatcagctccctgagctggaatctgtcctcaaacagaactcagatgacgcg
aatccttctcagaaaaagcacaaagtgctacttcgccagttcagcatgggagatgagaaa
ctgcagaaacgacagccaatcaaaagcacagatgagattctgtttaaggtgtactgtagc
gaccacacctacaccaccatccgagtgcctgtgtctgcctctgtcagagaggttgtgtct
gctgtatcagataaactgggctcacaagacgaccttctcgtcgttcaccttagctcagct
ggtgataaagtggtgctgaagcccaatgaagtgtccatcttctcctccctcagtattaat
ggtcgtctgtttgtctgctccagggaacagattaactcactgactccactaccagagcaa
gagggaccgtctgctggctccatgtccacccttgagctaatgagctccaaagaggtggcc
taccagatgaccctttatgaatgggaactcttcaactgtgtgcatgagcacgagttgatt
taccacacgtttggccggcagcactttaaaaaggctacggcgaatctagatctctttctg
cgccgtttcaatgagatccagctctgggtggtgacggaggtgtgtctctgctccaccctc
agcaaacgcgtccagttgctcaagaaattcatcaaaattgctgcccactgtaaagagttt
aggaatctgaactcgttctttgctattattatgggattaagtaatccagcagtcagccgg
ctcagtcagacatgggagaaactgcccagcaagtttaaaaaggtttatgcagagtatgaa
aacttgatggacccctctaggaaccacagagcataccgcctcaccgtggctaagctggac
ccacccatcatacccttcatgcctttactgattaaagatatgacgtttactcatgagggc
aacaagacttttgttgacagtttggtgaattttgagaaaatgcgaatgattgccaacaca
gtccggataataagatactgcagaagtcagcccttcaaccatgaagctcctcaagctacc
aagaaccaccaggatgttcggctctatgtgcgacaaatcagtgtgattgacaaccaacgt
actctgtcccaactttctcacaagctggagccccgacgcccctga
DBGET
integrated database retrieval system
