Ictalurus furcatus (blue catfish): 128609470
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Entry
128609470 CDS
T09387
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128609470 (dhx9)
03012 Translation factors [BR:
ifu03012
]
128609470 (dhx9)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128609470 (dhx9)
5.6.2.6 RNA 3'-5' helicase
128609470 (dhx9)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128609470 (dhx9)
Translation factors [BR:
ifu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128609470 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
AAA_19
ResIII
nSTAND3
ATPase
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
128609470
NCBI-ProteinID:
XP_053483920
LinkDB
All DBs
Position
7:257904..273191
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AA seq
1270 aa
AA seq
DB search
MGDIKNFLYAWCGKKKLTPNYDIRAAGNKNRQKFLCEVRVDGFSYIGMGNSTNKKDAQAN
AARDFVNYLVRVGEMSASEVPALGASFPDVPDGGGGEGSGFGTLPSSGPLPPHLLVKQEI
ETTEPSAVPVPGVTGLGYSGMNNPQWDRGANLQDYYSRKEEQDAKATLESEEVDLNAGLH
GNWTLDNAKARLNQFFQKEKVQTDYKYNQVGPDHNRSFIAEMTIFVKQLRRNIFAREHGS
NKKLAAQSCALSLVRQLYHLGVIEAFTGQTKKKEGETLEVYNVNVSDELKHQLRSVIQEL
GIQVPPPDPSGPVSLIQGKLAHFEPSQKQNTGGVVQWSPPQINWNPWTSSNIDEGPLAFC
TPEQISSDLQSELRYQLDHDPILQERLHEREQLPVKKFEEEIMRTINSSPVVIIRGATGC
GKTTQVPQYILDQYIQEGRASECNIVVTQPRRISAVSVAERVAYERAEDLGKSCGYSVRF
ESILPRPHASILFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVIHAFP
DVRVVLMSATIDTTMFREYFFNSPIIEVFGRTYPVQEYFLEDCIQMTGFVPPPSDKKRKD
KDEEGGEEEVNCNLVCGPEYGPETKRSMAQMNEKETPFELIEALLKYIETLQVSGAVLVF
LPGWNLIYSMQKHLEMNAHFGSNHYRILPLHSQIPREEQRLVFEPVPDGVIKVILSTNIA
ETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHL
CSKARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLAKAIEPPPLDAVIEAEHTL
RELDALDANDELTPMGRILARLPIEPRLGKMMIMGCILNVGDAVCTISAASCFSEPFISE
GKRLGFVHRNFAGTRFSDHVALLSVFQAWDEVRMGGEEAEARFCEHKRLHMSTLRMTWEA
KVQLKDILINTGFPEECLMNQVFNNVGPDNNLDVVISLLTYGSYPNVCYHKEKRKILTTE
GRNALIHKSSVNCPFSSQDPSYPSPFFVFGEKIRTRAISAKGMTMVSPLQLILFAAKKIS
SDGEVVVLDDWINLRIEHEVAGSIAGLRAAMEALVVEVTKDPEYIRSIDPTNERLLNVIR
LLSRPSSAGLNLMTSNPRFGDGPRPPKMSRMDGGDGGFRGRGGYRGGGGYGGGGYRGSGG
YRGSGGYRGSGGYRGSGGYRGSGGYRGGGGGGYRGSGEYRGGGGGGGGYRGGGGGYGGGR
GFNRGGYGGF
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgggggacataaaaaattttctgtacgcctggtgcggaaaaaagaagttgactccgaac
tacgatatccgggcggcgggaaataagaacaggcagaagtttctgtgtgaggtgagggtt
gacggtttcagttacatcggaatgggaaactccaccaataagaaagatgcccaggccaat
gcagcaagagactttgtaaattatctggtccgtgttggagagatgagtgcttctgaagta
cctgctttaggggccagttttccagatgttcctgatggtggaggaggtgaaggaagtggg
tttgggactctgccttccagtggtcctttgcctccacatttacttgtgaaacaagagata
gagactactgagccgagcgccgttccggttcctggagtgactggtctcggctactctggc
atgaataatcctcagtgggaccgaggtgctaacctacaggactactactccaggaaagag
gagcaggatgcaaaagctaccctggagtctgaggaagtagatctaaatgccggtctgcac
ggaaactggactttggacaacgcaaaggctcgtctgaaccagttctttcagaaagagaaa
gtccaaacagactacaaatacaaccaagtgggaccagaccacaacaggagcttcattgct
gaaatgactatctttgtgaaacagctgcgtaggaatatttttgctcgtgagcatggctcc
aataaaaagctggccgcccagtcgtgcgctctttccctggtccgtcagttgtaccatctc
ggcgtcatcgaggctttcacgggacagaccaagaagaaagaaggagagacgctggaggtg
tataacgtgaatgttagcgacgagctgaagcatcagctacggagcgtcatccaagagctt
ggcatccaggttcctccacctgatcctagtggtccagtgtctttgattcagggaaagttg
gcgcactttgagccgtcccagaagcagaacacaggaggtgtggtgcagtggtctcctcct
cagatcaactggaacccttggaccagcagcaacatcgatgagggacctttggctttttgc
accccagagcagatcagttctgacctgcaaagcgaactccgctaccagttagatcatgac
cccatcctgcaggagaggctgcatgagcgagagcagttgcctgttaaaaagtttgaagaa
gagatcatgcgcacgatcaacagcagtccggtagtgatcatccgcggggccaccggctgc
ggaaagaccactcaggtgccgcagtacatcctggaccagtacattcaagaaggaagagcc
tctgagtgcaacatcgtcgtcacccagcctcggcgaatcagcgcagtgtctgtggctgag
cgcgtggcgtatgagagagctgaggatcttgggaagagctgcgggtatagcgtgcgtttt
gagtccatcctgccaaggccgcatgccagcatcctcttctgcaccgtcggggttctcctg
aggaagctggaagccggaattcgagggatcagccacgtgatcgtggatgaaatccatgag
cgagacataaacaccgatttcctgatggtggtgttaagagacgtgatccacgccttcccc
gacgtccgcgtcgtcctcatgtccgccaccatcgacacgaccatgttcagagaatacttc
ttcaacagtcccatcatagaagtgtttggacgcacgtaccccgtgcaggagtatttcctg
gaggactgcattcagatgaccgggtttgtcccgccgccgtctgataagaagcgaaaagac
aaagacgaggaaggtggtgaggaggaggtcaactgtaacctggtgtgtggacccgagtac
ggtccggagacgaaacgctccatggcccaaatgaacgagaaggaaacgccgttcgagctg
atcgaggcgctgctgaaatacatcgagacgttacaagtgtccggggccgtgctggtcttc
ctgcccggctggaatctcatctattccatgcagaaacacttggagatgaacgcacatttt
ggtagcaatcactacaggatcctgcctctccactctcagatccccagagaggagcaaagg
ctggtgtttgagcctgtacctgacggcgtgatcaaggttattctatcaacaaatattgcc
gagaccagcattacaatcaacgacgtggtctacgtcattgactcctgcaaacaaaaggtg
aagctatttactgcgcataacaacatgaccaactacgccactgtttgggcatccaaaacc
aacctggagcagcgaaagggccgagctggccgcgtcagaccgggcttctgcttccacctg
tgcagcaaagcacgctttgagaaattggagacccacatgactccggagatcttccgcacg
ccgctgcacgaggtggcgctcagcatcaagcttctccggctcggtgctatcggccatttt
ctggccaaagcgatcgagccacctcctctggacgccgtcatcgaagccgaacacaccctc
cgagagctagatgccctcgacgctaacgacgagctgaccccgatgggacgcatcctagca
cgacttcccattgagcctcgtctgggaaagatgatgatcatgggctgtatcctaaacgtc
ggagatgccgtttgcaccatttccgccgcctcgtgcttctccgagccgttcatcagcgag
ggcaagcgtttagggtttgttcacaggaactttgcaggcacacgattctctgaccacgtg
gccctactttctgtctttcaagcctgggatgaagttaggatgggtggcgaggaggcagaa
gccaggttctgtgagcacaagcgtttgcatatgtccactttaaggatgacttgggaagcc
aaagtccagctaaaggatatcctaattaacaccggttttcctgaagagtgcctaatgaat
caggtgtttaacaacgtggggccggacaacaatctggacgtggtgatctccttgctgact
tacggctcctaccccaacgtctgttaccacaaagaaaagaggaaaatcttgactactgaa
ggtcgaaacgcgctcatccataagtcttccgttaactgccccttctccagtcaagacccg
agctacccgtcacctttcttcgtcttcggggaaaagattcgaacccgagccatttcagcc
aaagggatgaccatggtcagccctctgcagcttattttgttcgctgccaagaaaatctca
tctgacggagaggtggtcgtacttgatgactggatcaacctgcgtattgagcatgaagta
gctggtagcatcgcaggactaagagctgcgatggaggctctagtggtggaagtgaccaaa
gacccagagtacatcagaagtatcgatcccaccaatgaacgcctgctgaatgtcattcgg
ctcctctccagaccctcttctgcgggactcaacctcatgaccagcaatccacgttttgga
gatggtccacgacctccgaagatgtcccggatggatggcggagatggagggttccggggt
cggggaggatacagaggaggtggaggatacggtggtggagggtacagggggtctggggga
tacagggggtctgggggatacaggggatctgggggatacagggggtccggagggtacaga
ggatctggagggtacagaggtggaggtggaggtggataccgggggtcgggcgagtatcga
ggtggaggtggaggtggaggtggatacagagggggtggaggtggttacgggggaggtcgt
gggttcaacagaggtggatatggaggattttag
DBGET
integrated database retrieval system
