Ictalurus furcatus (blue catfish): 128610405
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Entry
128610405 CDS
T09387
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K20894
shank-associated RH domain-interacting protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04217
Necroptosis
ifu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128610405 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128610405 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128610405 (sharpin)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
128610405 (sharpin)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
PH
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
128610405
NCBI-ProteinID:
XP_053485683
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Position
7:complement(29562433..29574947)
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AA seq
418 aa
AA seq
DB search
MALSSGVWAPVFPSPALQQGSGSGCGTVLMSVRVSVSRATLRTLRSLRSPGVCEDDAALR
LQLSMDPNRPGDFRLTLRDSGSNGRIMSLAEFELCAVRYEIKSPRCHELCVIKPPHDTLT
FTFRSEQEAQEWATVMISSLREAHRVAGIASQPTEDSIDYLKPVEQSAALSLSAKEELCA
ELARAIEAGDAQAAVQHATSLAHQQIPLTIQPARKDSEDGEISLAVAVEDATSSCCVTVK
VAPHMTVASLKQQMFAEYGFHPRVQRWVIGQCLCSEQRSLVSYGVCRDGDTAFLYLLSAR
HARLSRLQCQQDQESALLTPTPKPAPTLAPASHDWRGYSTLPPRLHHSNTGGGGGAGKHS
ISDSMNLERLQLGGPGLGWSCPSCTFINKSTRPGCEICSTERPTRPELSASEDAALLL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagttcgggggtttgggctccggtttttccgtctccggcgctccagcagggc
tcgggctcgggctgcggtacggtgctgatgtcggtgcgggtgtcggtgtcgcgggcgacg
ctgcgaactctgcggtcgctccgttctcccggtgtctgcgaggatgacgcggctctccgc
ctacagctcagcatggacccgaaccgacccggagacttccgcctcaccctcagagactcc
ggcagtaacggcaggatcatgtctctggccgagttcgagctgtgcgccgtgaggtacgag
atcaagtcgcctcgctgccacgagctgtgcgtcatcaagccgccgcacgacacgctgacc
ttcaccttccgcagcgagcaggaggcccaggagtgggccaccgtcatgatctcgtcactg
agggaagcccacagagtcgcaggcatcgcctcgcagcccaccgaggactcgatagactat
ctgaaacctgtcgagcagagcgcagccttgtcattatcagctaaagaggagctgtgtgct
gagctggccagagccatcgaggccggggacgctcaggcggcggtgcagcacgccacgtcg
ctggcacaccagcagattccgctcaccatccagccggctcgaaaggactccgaagacgga
gagatcagcttggcagttgcggttgaagatgccacgtcgtcctgttgcgtcacggttaaa
gtcgccccacacatgactgtggcgtctctcaagcagcagatgtttgccgaatacggtttc
cacccgcgagtgcagcgctgggtcatcggtcagtgtttgtgctctgagcagcgctcgctg
gtgtcgtacggcgtgtgtcgagacggagacacggcgtttctctacctcctctcagcgcgc
cacgcccgccttagccgtctgcagtgccagcaggaccaggagagcgccctcctcacaccc
acgcccaaaccagcgccgaccctggcaccggccagtcacgactggagaggctacagcacg
ctgccgccccgactccatcactccaacacagggggcgggggcggagctgggaagcacagc
atcagtgacagcatgaacctggaaagactgcagctgggtggacccgggctgggctggtcg
tgtccttcgtgtacatttataaacaagtcgacgaggcccggttgtgaaatctgcagtaca
gaaagacccactcgaccggagctcagcgcatctgaggacgcagctcttctcctataa
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