KEGG   Ictalurus furcatus (blue catfish): 128615339
Entry
128615339         CDS       T09387                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04010  MAPK signaling pathway
ifu04060  Cytokine-cytokine receptor interaction
ifu04150  mTOR signaling pathway
ifu04210  Apoptosis
ifu04217  Necroptosis
ifu04350  TGF-beta signaling pathway
ifu04620  Toll-like receptor signaling pathway
ifu04621  NOD-like receptor signaling pathway
ifu04622  RIG-I-like receptor signaling pathway
ifu04625  C-type lectin receptor signaling pathway
ifu04920  Adipocytokine signaling pathway
ifu05132  Salmonella infection
ifu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128615339 (tnfa)
   04350 TGF-beta signaling pathway
    128615339 (tnfa)
   04150 mTOR signaling pathway
    128615339 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    128615339 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    128615339 (tnfa)
   04217 Necroptosis
    128615339 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128615339 (tnfa)
   04621 NOD-like receptor signaling pathway
    128615339 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    128615339 (tnfa)
   04625 C-type lectin receptor signaling pathway
    128615339 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    128615339 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128615339 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128615339 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ifu04052]
    128615339 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:ifu00536]
    128615339 (tnfa)
Cytokines and neuropeptides [BR:ifu04052]
 Cytokines
  Tumor necrosis fators
   128615339 (tnfa)
Glycosaminoglycan binding proteins [BR:ifu00536]
 Heparan sulfate / Heparin
  Cytokines
   128615339 (tnfa)
SSDB
Motif
Pfam: TNF Arm_4
Other DBs
NCBI-GeneID: 128615339
NCBI-ProteinID: XP_053493304
LinkDB
Position
12:complement(23057419..23060261)
AA seq 230 aa
MASDSQVVLDVDGPRVTIVREKASWSASGVWRTCGVLLAMALCAAAAVCFTQNKTQDKPD
ETQEIKHSLRQISQTAKAAIHLSGHYNPQVSNESMQWFDNADQSFSSGLKLEDNEIKILH
NGLYFVYSQASYRLLCKAESDETEGEVMHMSHAVYRWSDSYSSWKPLLSATRSACRKTTE
EYQKYWYGAVYLGAAFNLEAGDRLRTVMDGKLLSKVESAGGKTFFGTFSL
NT seq 693 nt   +upstreamnt  +downstreamnt
atggccagtgacagtcaggttgtattggatgtggacggaccccgggtgacgatcgtacga
gagaaggcctcgtggtctgcttcaggagtctggagaacgtgtggagtccttctcgccatg
gctctctgcgctgccgctgctgtgtgctttactcaaaacaagacgcaagacaaaccagac
gaaacccaagaaatcaagcactctctcaggcagatttcccagactgcaaaggctgcgatc
catctctcaggtcactacaacccgcaggtttcgaacgaatctatgcagtggttcgacaac
gcagaccagtccttctcttcaggcttaaaactggaggacaacgagatcaagattctccac
aacggcctctacttcgtctacagccaggcctcgtaccgtctgctctgtaaagccgaaagc
gacgagaccgagggcgaggtgatgcacatgagccacgccgtgtatcgctggtctgactct
tacagctcatggaagccgttgctgagcgccacgagatcggcctgcaggaaaacaaccgaa
gagtaccagaaatactggtacggcgccgtctacctcggggccgcgttcaacctggaggcc
ggagaccgactgcgcaccgtcatggacgggaagctgctgtccaaagtggagagcgccggc
gggaaaaccttcttcggaacgttctccttataa

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