Ictalurus furcatus (blue catfish): 128615623
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Entry
128615623 CDS
T09387
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03420
Nucleotide excision repair
ifu04110
Cell cycle
ifu04114
Oocyte meiosis
ifu04120
Ubiquitin mediated proteolysis
ifu04141
Protein processing in endoplasmic reticulum
ifu04310
Wnt signaling pathway
ifu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128615623 (rbx1)
04120 Ubiquitin mediated proteolysis
128615623 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
128615623 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128615623 (rbx1)
04350 TGF-beta signaling pathway
128615623 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128615623 (rbx1)
04114 Oocyte meiosis
128615623 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128615623 (rbx1)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128615623 (rbx1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
128615623 (rbx1)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128615623 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
128615623 (rbx1)
Cul2 complex
128615623 (rbx1)
Cul3 complex
128615623 (rbx1)
Cul4 complex
128615623 (rbx1)
Cul7 complex
128615623 (rbx1)
Cul8 complex
128615623 (rbx1)
Cul9 complex
128615623 (rbx1)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128615623 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
128615623 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
128615623
NCBI-ProteinID:
XP_053493826
LinkDB
All DBs
Position
12:complement(28846852..28849103)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgatggacgtcgacaccccgagcgggacaaacagcggcgccagtaagaag
cgttttgaagtcaaaaagtggaatgcagtggctctgtgggcctgggacatcgtggtggat
aactgcgccatctgcagaaaccacatcatggacctgtgtatagagtgtcaggccaatcag
gcttctgccacatcagaggagtgcacagtggcctggggagtgtgtaatcatgcatttcat
ttccattgcatctcccgatggttaaagacgcggcaggtgtgtcctctggacaacagggag
tgggagttccagaagtatggacactga
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