Ictalurus furcatus (blue catfish): 128615710
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Entry
128615710 CDS
T09387
Symbol
cxcr4a
Name
(RefSeq) C-X-C chemokine receptor type 4a
KO
K04189
C-X-C chemokine receptor type 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03250
Viral life cycle - HIV-1
ifu03260
Virion - Human immunodeficiency virus
ifu04020
Calcium signaling pathway
ifu04060
Cytokine-cytokine receptor interaction
ifu04144
Endocytosis
ifu04672
Intestinal immune network for IgA production
ifu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128615710 (cxcr4a)
03260 Virion - Human immunodeficiency virus
128615710 (cxcr4a)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128615710 (cxcr4a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128615710 (cxcr4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128615710 (cxcr4a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128615710 (cxcr4a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128615710 (cxcr4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ifu04030
]
128615710 (cxcr4a)
04050 Cytokine receptors [BR:
ifu04050
]
128615710 (cxcr4a)
04090 CD molecules [BR:
ifu04090
]
128615710 (cxcr4a)
G protein-coupled receptors [BR:
ifu04030
]
Rhodopsin family
Chemokine
CXC Chemokine
128615710 (cxcr4a)
Cytokine receptors [BR:
ifu04050
]
Chemokine receptors
CXC Chemokine
128615710 (cxcr4a)
CD molecules [BR:
ifu04090
]
Proteins
128615710 (cxcr4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
Motif
Other DBs
NCBI-GeneID:
128615710
NCBI-ProteinID:
XP_053493980
LinkDB
All DBs
Position
12:11295878..11298108
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AA seq
364 aa
AA seq
DB search
MSYYEHIIFGDDLVSDNQTDFGSGDLGADMETPCNREGNQDLQRILLPTVYGVIFTLGLV
GNGLVVAVMGCQRKSRTMTDRYRLHLSVADLLFVLSLPFWAVDAASGWRFGGFMCVLVHM
VYTVNLYGSVLLLAFISLDRYLAVVHATSSQATRRLLSERVVYAGAWLPAALLTAPDLAF
ARAEEVGGVDGTRVVCQRIYPVDSALAWMAAFRAQHVLVGFVLPGLVILVCYCVIIVTLS
RGSKGAQKRRALRTTVALVACFFACWLPYCAGIVVDTLLQLGVVTHSCALESGLETWIYV
TEALAYFHCCLNPILYAFLGVKFKKSARRALTGGRGSSLKILAKKKGGMSSVSTESESSS
FHSS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattacgagcacattatatttggggatgacctcgtcagtgataaccagaccgac
tttggttctggagacctcggcgctgatatggagacgccatgcaaccgcgaggggaaccag
gacctgcagaggattttgcttcccacggtgtacggtgtgatcttcacgctggggcttgtg
ggtaacgggctggtggtggcggtgatggggtgccagaggaagtcgcgcaccatgaccgac
cgctaccggctgcacctgtccgtagccgacctgctgttcgtgctctcgctgccgttctgg
gcggtggacgcggcaagcggctggcgcttcggcggcttcatgtgcgtgctcgtgcacatg
gtgtacacggtgaacctgtacggcagcgtgctcctgctcgccttcatcagcctggaccgc
tacctggctgttgtgcacgctacgagcagtcaagccacgcgtcgcctgctgtccgagcgc
gtggtgtacgcgggcgcgtggctccccgcggcgctcctcactgcgcctgacttggcgttc
gcgcgcgcagaggaggtcggcggcgtggacgggacgcgcgtcgtgtgccagcgcatctac
ccggttgactcggcgctcgcgtggatggcggcgtttcgcgcgcagcacgtgctcgtcggc
ttcgtactgcctggcctcgtgatcctggtctgctactgtgtcatcatcgttacgctgtcg
cgcggctccaaaggggcgcagaagaggcgcgcactgcgcaccaccgtggcgctcgtggct
tgcttcttcgcctgctggttgccctactgcgcgggcatcgtcgtcgacacgctcctgcag
ctcggcgtcgtcactcacagctgcgcgctcgagagcggcctcgagacgtggatctacgtc
accgaggcgctcgcgtacttccactgctgcctcaacccgatcctctacgcctttctcggg
gtcaagtttaagaagtcggcgcggcgcgcgctcaccggcggacgtggatccagtctcaag
atcctcgccaagaagaaaggaggcatgtcctcggtgtccacggagtccgagtcgtccagc
tttcactccagttaa
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