Ictalurus furcatus (blue catfish): 128617227
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Entry
128617227 CDS
T09387
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00514
Other types of O-glycan biosynthesis
ifu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128617227 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128617227 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ifu01003
]
128617227 (rfng)
Enzymes [BR:
ifu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
128617227 (rfng)
Glycosyltransferases [BR:
ifu01003
]
Glycan extension
O-Glycan
128617227 (rfng)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
128617227
NCBI-ProteinID:
XP_053496252
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All DBs
Position
13:2565547..2575861
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AA seq
366 aa
AA seq
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MHLSPVGTNRRCFLASSALCAIVLLLIPTLQTPQQQGELPRPLPQNRPARGDNTTGYKGA
SNAKHSRVIGPPFPRDKSQRDSIGADILSSRSKEPLGLKDIFIAVKTTRKYHKSRLELLF
QTWVSQAKEQTFIFTDGEDKELKQKTEGNVINTNCSAAHTRQALCCKMSVEYDKFIESQK
RWFCHVDDDNYVILPSLLQLLSSYSHTQDVYLGRPSLDHPIEAPERVRSDGSTSVRFWFA
TGGAGFCVSRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVPLIHTNLFHS
HLENLQRMPAADVLKQVTLSYGGFENRRNVIPIAGAFSLTEDPSRFKTVHCLLYPDTEWC
LRNSHR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtctccggtcggcacaaacaggcgttgcttcctggcctcttcggccctctgt
gccatcgtgcttctgctgatcccgactctccaaacgccgcagcagcagggcgagctgccc
cgacctctgccccaaaacaggcctgccagaggagacaacaccacaggctacaaaggtgct
agtaacgctaagcacagcagagtcattgggccaccctttcctcgtgacaaatcccaaagg
gactcaattggtgctgacatccttagctcacggtccaaggagcctctgggactgaaagac
attttcattgcggtcaaaaccaccaggaagtatcacaaatcacgtctggagctgcttttt
cagacctgggtgtcacaagccaaggagcagacattcatcttcactgatggtgaggataag
gagctgaagcagaaaacagaaggcaacgtcatcaacaccaactgctcagccgctcacaca
cgacaggcgctgtgctgcaagatgtctgtagagtatgacaaattcatcgagtcgcagaaa
agatggttctgtcacgtggatgacgataattatgttatccttccgagtctgctgcagctg
ctctcatcctattcccacacgcaggatgtgtacctgggccggcccagtctcgatcaccct
atagaggctcctgagagggtcaggagcgatggatcgacgtctgtcaggttctggtttgct
actggaggtgctggcttctgtgtcagtcgaggcctggcactcaagatgagtccatgggca
agtctggggaacttcatcactacagcagagaagatccgtctcccggatgactgcacgatc
ggttacatcatcgaggcgctgctggaggttcctctgatacacaccaacctcttccactcg
catctggagaacctgcagaggatgcctgctgcggacgtcctcaaacaggtcaccctcagc
tatggtggttttgagaacaggaggaacgtgatacctattgccggagccttctccttgact
gaggacccttcacggtttaagaccgttcactgcttactttatcctgatactgaatggtgt
ctccgcaacagtcatcgctga
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