Ictalurus furcatus (blue catfish): 128618503
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Entry
128618503 CDS
T09387
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04010
MAPK signaling pathway
ifu04020
Calcium signaling pathway
ifu04510
Focal adhesion
ifu04540
Gap junction
ifu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ifu01001
]
128618503 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ifu04090
]
128618503 (pdgfrb)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128618503 (pdgfrb)
Protein kinases [BR:
ifu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
128618503 (pdgfrb)
CD molecules [BR:
ifu04090
]
Proteins
128618503 (pdgfrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
Adeno_E3_CR1
Ig_VEGFR-1-like_5th
ICAM_N
RIFIN
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
128618503
NCBI-ProteinID:
XP_053498104
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All DBs
Position
14:9778282..9831168
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AA seq
1081 aa
AA seq
DB search
MQGVRVSLFPLTPLITALLILLLCSASSGLELSPSTKEIILTANDSISIVCSGWAPVSWR
YKREDFSAPHFRMENRSNTSSVLHLTNVTWRHTGVYVCSEDGSEESREVAVYVPDPDEWF
LENEYAAVTRTSNEGTVPCLVTDPKINVTLHDKDTEIPVMGKYIPTSGFTGILEDKIYKC
RGERNGEEKWSNVFYVFSILVPEALDTHINASKTVLKQGEALNVNCTAHGVELVFFYWEF
PNKAKDVEILTDIISATMSMRSFLNISQTTLAHSGEYVCHAQESVGNQRTSLSINITVLE
RGFVELSSFLNPNVSALLHENVELRVEVEAYPKPHIRWSKDGAVINGDNVINTRQEQETR
YISTLTLVRIRLQQKGYYTIHVANEDDSKEMTFDLVVKVPPQITELSDHHLPEKKHAVTC
MAEGVPSPRIQWFSCDSMHKCSNKSALWSPLVPDTESINIVTNSTYNENRKIHQVYSQVM
FLHPQQITVRCQARNERGARARDIRLVTSTLFSQVAVLAAVLALVVIAIIFIIILIAVWR
KKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEA
TAYGLTNSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPL
YLVTEFCRYGDLVDYLHRNKQSFLQNYANKSPLTNGSDSHICIDSDVPSGKGYVLFGSES
DGGYMDMRKEDMTEYVAMQELTDSIKYADIQPSPYESPYQQDIYQEQGHRVDLSLVISDS
PILSYTDLVGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDN
NYISKGNTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNDLFYN
ALKRGYRMAKPMHAAEDIYEVMRKCWEEKFEKRPEFSYLVQEMGNMLTEGYKKRYSQVSE
SFQKSDHPAVVRSKPRVPSPFPGTLPPSSPSTIFPPSSTPNRCLEADQDMAPAPYNGYII
PIPDPKPEEECQEVSMPTESPSSSVRSEAETASLEAPSAEQECYEQLKELSNTPDAEESF
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagtccgtgtcagccttttcccactgacacccttaataacagctctcctgatc
ctcctgctgtgctcagctagttctggtctggagctgagccccagcacaaaagagatcatc
ctgactgcgaatgactccatctccatcgtctgttccggctgggcgcccgtctcctggcgc
tacaaaagagaagatttttcagcacctcatttcagaatggagaaccgatccaacacctct
agtgttctccacctgacgaatgtgacatggagacacacaggagtgtacgtgtgttctgag
gatggctctgaggagagcagagaggtggctgtttatgtgcctgacccggacgagtggttt
ttggagaatgaatatgctgcagtcactaggacaagcaatgaagggacagtcccctgcctg
gtgacagaccccaaaattaatgtgaccctccatgataaagatactgaaatcccagtgatg
ggcaagtacatacccaccagtggctttacaggaatactggaagacaagatttacaaatgc
agaggagaacgcaacggagaggagaagtggtccaatgtattctatgtcttcagcatctta
gttcctgaggcgctggacacccacatcaatgcctcgaagacggtgctgaaacaaggcgag
gcgctcaacgtcaactgcacggcccacggagtcgagcttgtcttcttctactgggagttt
ccgaacaaagctaaagatgtggaaatcctgacagacataatctcggcgaccatgagcatg
cgctccttcctgaacatttcccaaaccactctggcacactctggagagtacgtctgccat
gcacaagagagcgtgggcaaccaacgtacttctcttagtatcaacatcactgtgctggag
agagggtttgtcgagctgagctcatttctaaacccgaatgtctcagcattactgcatgag
aacgtggagctgagggtcgaggtggaggcatatcccaagcctcacatccgctggagcaaa
gatggagccgtgatcaacggagacaacgtcatcaacacgagacaggaacaagagaccagg
tacatcagcacattaactctagtgagaatccgcctacagcagaaaggatattacactatt
catgttgccaatgaggacgattccaaagagatgacctttgacctagtggttaaagttccc
ccacagataactgaactttctgatcatcacctgccggagaaaaagcacgccgtcacctgt
atggcagagggagtcccatctcccagaatccagtggttcagctgtgacagcatgcacaaa
tgcagcaacaaaagtgctctgtggagccccctagtgccagatacagagagcatcaacatt
gtgactaacagcacttataatgagaaccgcaagatccaccaggtgtacagccaggtgatg
tttctccatcctcagcagatcactgtccgctgccaggccaggaacgagagaggagctcgg
gcaagggacatcagacttgtcactagcactctgttctcacaggtggctgttctggctgct
gttctggcactagtcgtcatagccatcatttttattatcatcctaatcgccgtgtggagg
aagaagccgcgttatgagatcagatggaaggtgattgagtctgtgagtcaggatggacat
gagtacatctatgtggaccctattcacctcccctatgacctggcctgggagatgcctcga
gacagcctggtcctcggtcgcactctgggatcaggagcctttggaagagtggtagaggca
actgcatatggacttaccaattcccaatcttctactaaagtggctgtgaaaatgctcaaa
tcgacggcgcgtaggagtgagactcaggctctgatgtccgagctgaagatcatgagtcac
ctgggtccacacctcaacattgtcaacctgctgggagcctgcactaaacaaggtcctctg
tacctggtgacggagttctgtcgatacggagacctggtagactacctgcacaggaacaag
cagagcttcctgcagaactatgcaaacaagagccccctcactaatggtagtgatagccac
atctgcattgactctgatgtgccttctggaaaaggctatgtgttatttggctctgagagt
gacggtggttatatggacatgagaaaagaggacatgactgaatatgtggccatgcaagag
ctgacggacagcatcaaatacgctgatatccagccgtctccgtatgagtcaccatatcag
caggacatctaccaagaacaaggtcacagagtggacctttcactggtcatcagtgattct
cccattctgagctacactgatctggtgggcttcagcttccaggtggccaaaggcatggag
tttctggcctccaaaaattgtgttcatcgggacctggctgctaggaatgtcttaatatgt
gagggaaaactggtgaaaatttgtgacttcgggttggccagagacatcatgcatgacaac
aattacatctccaaaggcaacacgttcctgcctctgaagtggatggccccagagagcatc
ttccacaacctctatacaacactcagtgatgtctggtcttatggtattttgctgtgggag
attttcactctgggaggaactccatacccagatctccctatgaatgacctcttctataat
gctcttaagagaggttatcggatggccaaacccatgcacgctgcagaggacatttatgag
gtgatgaggaagtgctgggaagagaagtttgagaagaggccggagttctcctatctggtg
caggagatggggaacatgcttaccgaaggctataaaaagcgatactcccaggtcagcgag
agctttcagaagagtgatcatccagctgtggtacgcagcaagcccagggtgccatctcca
ttcccgggcacactccctccctcttccccttccaccatttttcctccatcctccacacct
aaccgttgcctagaggctgatcaagacatggcaccagcaccttataacggttacatcatc
ccaatccctgaccccaagcctgaagaagagtgccaggaagtcagtatgccaacagaaagc
ccctcaagctctgtaaggtctgaggcagagacagcatcattggaggctcccagtgcagag
caggagtgttatgaacaactgaaggaactctccaacactcctgacgcagaggagagcttc
ctgtaa
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