Ictalurus furcatus (blue catfish): 128619476
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Entry
128619476 CDS
T09387
Symbol
agrn
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128619476 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128619476 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128619476 (agrn)
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128619476 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
SEA
Kazal_CFAI
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
128619476
NCBI-ProteinID:
XP_053499655
LinkDB
All DBs
Position
15:17708400..17979480
Genome browser
AA seq
2045 aa
AA seq
DB search
MMRGALCLLGWALVAGLALCPRYCRASCPEKKLQEREEEANVVLTGTVEEILNMDPVHNT
YSCKVRVWRYLKGKTIVKGDLLLDGGNKVMIGGFGDPDICDNQVATGDTRIFFVNLAPEY
MWPVHKNELMLNSSLMRITLRNLEEVELCVEDHTTHCISDKPGTPPHVPPPDGCRGKLCG
FGATCQRDSADPSKGECVCKKMVCPSVVAPVCGSDSSTYSNECELEKAQCNTQRRIKVMR
KGQCSLKDPCSEVTCSYGSTCIQSSDGLSAKCMCPLSCDHVPKVTVCGSDGLDYPSECAL
NMKACSTNKNIRLQHIGSCDPCRMHQNSLNIICVYDAQTQKTQTLAPPSACPSGPEPLCA
SDGSNYNSECQMKRTALQKERQLTKVHSGPCKKQEECQEDCKFSAVCLLEHGRARCSCEP
IRCDGTYTPVCGNDGHTYPNDCERRRAECLTQTTIHIKQQGPCDLNAPSPCLKMTCEFGS
SCVVKNGEAVCECLDTCLQASDPVCGSDGQTYTSQCQMNAIGCTLQKHIQIKHKGPCDKA
CTNCSFGAICDEQTRRCVCPKECVVSNQPVCGSDGTTYMNECELHVRACTEQLDLHVVVQ
GECKTCGSTVCSWGARCVQNKCECPQCAGQPTAEVCGTDSITYTNECELRSASCKQKKDI
EVARSGSCDEDCGSGGSGSGVEACEQERCRRFGGSWDEDREDDGCVCDFTCQNVPHIEVC
GTDGKNYSNECELKKTRCEKRVDLLLQNQGPCTAIEKHMSDMITVTHCSGTVYGCCKDNK
TAALGVEMAGCPSKCHCNQYGSYGGMCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIVT
EKASGCTPCNCDAVGSVRDDCEQMTGLCSCKTGVKGMKCDVCPNGSKMAANGCDRGPQTS
CAELQCLYGASCVEVNGQVHCECPSPDCDQMNKSKVCGTDGVTYADYCQLRTIACRQDKE
ITVDHVGQCTESISVLGVKPTPLAITPHATPTAPVKVTPTHHGLTTTPFDYDEEDGTKYI
LEVAPPALESSTPFPTHSPPTTPHHPPRSPSPSSGFEDSGSGEPSGDDDTEGSAVEASGD
ELVGPTVAATTLPTGEVRSSCDNTPFGCCPDGKTIAITPDGTNCPSTMRFTGVLHLDQVE
GQEVFYTPELDDPKSELFGETARSIESALNELFRKSDVRKDFQSVRVKNLAPSNSIMAIV
EAHFDPDTRFTVEDVGDALLKQLKTAKEPGIVVKQPEEEYIRFNTYGISVRPFFTTTATT
VATATPTIATTTTTRSTMPPTTASITAHQPTTTRRPYSTRRTSTAAPITSTPTQPTTTSA
STTTVLSFQTQPVVKVHRPCDSQPCGHGGTCEEDGDDFICTCPAGRGGAVCEKAIKFFIP
SFGGKSYLAFPTMKAYHTVRIAMEFRASDTTGILLYNGQNGRKDFLSLALVEGKVELRFN
TGSGTCSVVSTVTVKPGQWHQLVVSRNRRNGSLSVDNEKPVEGQSPAGTDGLNLDTDLLI
GGVLEEMIQDVKERTSVSTGLTGCIRLLDVNNMVYNLQENGGNVVYGKAVGECGNNPCVP
NPCKHGALCQVKGAEMFHCKCINGFSGPTCADSHNPCEPNPCHPSAPCHVLPEGGYKCEC
PMGREGKHCRKLSDKRGAYIPFFSGDSYLELKGLHLYGHDLRQKVSMTVVLLANDSNGMI
FYNGQKTDSKGDFISLALNDGILEFRYDLGKGPAVIRSKEKLKLNVWNTVNLERANRKGE
ITINGKDPVRGEAPNQHTDLNLKESLYVGGAPDFRKLARPASIKAGFKGAIQKITLRGTP
ILKPDNALNSSDVSMYTHHPCSTYVCENGGECNPLLESYECVCPFGFTGPKCQHTTYEKA
AGESESIAFDGRTFIEYHNGVTKSEKALLVNKFELSIKTEATQGLLLWSGKGVERSDYIA
LAIVDGRVQMTYDLGSKPVVLRSSVRVNTNHWIRIKASRALRDGSLQVGNEAAVTGSSPL
AATQLDTDGALWLGGLEDMAVARRLPKAYSTGFVGCVKDVIVDGVDLHLVEDALNSPKIL
HCSAK
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaggagcgctgtgcttgctcggctgggcgctcgtagccgggctcgctttgtgt
ccgcgctactgccgggcgagctgccccgagaaaaagctgcaggagcgcgaagaggaagcg
aacgtcgtgctcaccggcaccgtggaagaaatcctcaacatggacccggtgcacaacacg
tactcctgcaaggtgagggtatggcgctacctcaaaggcaagaccattgtcaaaggagac
ctactgctggatggtgggaacaaggtcatgatcggtggtttcggggacccagatatctgc
gacaaccaggtggccaccggagacacacgtatcttcttcgtcaacctggccccagagtac
atgtggcccgtgcacaaaaacgagctgatgcttaactccagtctgatgaggattacactg
cgcaacttggaggaggtcgaactttgtgttgaagatcatactacccactgtatatcagac
aaacctggcacccccccacacgtcccacctcctgatggctgccggggaaagctttgtggc
ttcggcgcaacgtgtcaaagagactcagccgacccctcgaaaggagagtgtgtgtgcaag
aagatggtgtgtccttctgtggtggcgcctgtgtgcggctcggactcctccacctactcc
aacgagtgtgagctggaaaaggctcagtgcaacactcagagacgcatcaaggtgatgcgc
aagggccagtgttctctgaaggacccatgcagcgaggtgacgtgtagctacggcagcacc
tgcattcaatcttctgacggcctctccgctaagtgcatgtgtcctctgagctgtgatcat
gtgcccaaggttacagtgtgcggcagtgatggcttggactaccccagcgagtgtgccctc
aacatgaaggcctgctccaccaacaagaacatccgcctccagcacatcggctcctgtgat
ccatgccgtatgcaccagaacagcctcaacataatatgcgtgtatgacgcacagacccaa
aagactcagaccctggccccgccatcggcatgtccatcgggccccgagccactgtgtgcc
agcgacggaagcaactacaacagcgagtgccagatgaagcgcacggccctgcagaaggag
cgccagctgacgaaggttcactcagggccctgcaagaagcaagaggagtgccaggaagat
tgtaaattcagcgccgtgtgcttgttggagcacggaagggcgcgctgctcctgcgagcca
atccgctgtgacggcacttacactcctgtgtgtggtaacgacggccacacgtaccctaac
gattgtgagaggaggcgtgccgagtgcctcacccaaaccaccatccacatcaaacagcaa
gggccctgtgatctgaacgcgccgagcccatgtctgaagatgacgtgcgagttcgggagc
tcgtgcgtggtgaagaacggcgaggcagtgtgtgagtgcttggatacgtgcctccaagcc
tctgaccccgtgtgtggcagtgacgggcaaacctacaccagccagtgccagatgaatgcc
atcggttgcaccctgcaaaaacacatccaaataaagcacaaaggaccttgtgataaagcc
tgcacaaactgctcgttcggtgctatctgtgacgagcagacccgccgctgcgtctgtcca
aaggagtgtgtggtctccaaccagcccgtgtgtggcagcgacggcaccacttacatgaac
gagtgcgagctgcacgtacgcgcctgtaccgagcagctagacctgcatgtggtggtgcag
ggagaatgcaagacctgtggcagcactgtgtgtagttggggtgcccgctgtgtccagaat
aagtgtgagtgccctcagtgtgcgggtcagcccactgcagaggtatgcggcactgacagc
attacctacaccaacgagtgtgaactgcgctcggcatcctgtaagcagaagaaggacata
gaagtggcgaggtctggcagctgtgacgaagattgcgggtctggaggctcaggatccggg
gtggaggcctgcgaacaggagcgctgtcggagatttggtggctcgtgggacgaggacagg
gaggatgacggctgtgtgtgcgacttcacttgccagaacgtgcctcacatcgaggtctgt
gggacagatgggaaaaactacagcaatgagtgtgagctaaagaagactaggtgtgagaag
cgggtcgatctgctgcttcagaatcaaggcccatgtacagctattgaaaaacatatgtct
gatatgatcaccgtgacgcactgcagcgggactgtgtacggatgttgtaaagacaacaag
actgctgcgctgggtgtcgaaatggcgggatgtcccagtaagtgtcactgtaaccagtac
ggctcgtacggaggaatgtgtgaccccagcacaggccagtgctcctgcaagcccggagtc
gggggtctcaagtgcgaccgctgcgaacccggcttctggaacttccgcggcatcgtgaca
gagaaagcgagcggctgtacaccgtgtaactgtgatgcagtgggctcagtgagggatgac
tgcgagcagatgacaggcctctgctcctgtaagaccggagtgaagggcatgaagtgtgac
gtttgccccaacggaagcaagatggccgccaacggctgtgacagaggtccccagacgtcg
tgtgccgagctgcagtgcctctatggagcgtcatgtgtggaggtcaacgggcaggttcac
tgcgagtgtccgtctcctgactgcgaccagatgaacaagagcaaggtctgtggcacggac
ggtgtgacctacgctgactattgccagttgaggactattgcctgtcgacaggataaggaa
attactgtggatcacgtgggccagtgcacagaatccatctctgtgctgggggtcaagccc
acccccctggccatcactccacacgccactcccactgcacccgtcaaggtcaccccgaca
caccatggcctcaccaccaccccattcgactacgacgaggaggacggcacaaagtatata
ttggaagttgctcctccggctctggagtcatccacgcctttccccacccacagcccccca
accactcctcaccatccaccccgctccccatcaccctcctccggctttgaggattcaggc
agtggggagcccagtggggatgacgacacggagggtagcgcagtggaagcgagcggagac
gagcttgtcggtcccactgtagcagccaccactctcccaacaggtgaagtacgttcatcc
tgcgataacacacctttcggttgctgccccgatggcaagaccattgctatcaccccagat
ggaaccaactgcccatccaccatgcgctttaccggcgtcctgcacctggaccaggtagag
ggtcaggaggtcttttacacaccagagttggatgaccccaaatcagagctgttcggtgag
acagctcgcagcatcgagagtgctcttaatgagctgttccgcaagtctgacgtacggaaa
gatttccagagtgtccgagtgaaaaatctggctcccagcaactccatcatggctatagta
gaggctcactttgacccagacactagatttacagtcgaggatgtcggggatgcgttgctg
aaacagcttaagacagctaaagaacctggcattgtagtgaaacagcctgaggaggaatat
attcgtttcaacacttatggtatctctgtccgtccattcttcaccaccactgctaccact
gttgccaccgccacacccactatcgcgaccaccaccactaccagaagcaccatgccccct
accactgcgtccatcacggcacaccagccaaccaccacaagacggccctacagcacccgc
agaacctccacagccgccccgatcaccagcacccctacacagcccacaaccacttctgcc
agcaccaccaccgttctgtccttccagacccagcccgtcgtcaaagtccacaggccatgc
gactcacaaccctgcggccacggaggcacgtgtgaggaggacggtgacgatttcatctgc
acctgtcctgctggaagagggggagccgtgtgtgagaaagcgataaagtttttcatacca
tcctttggcggcaaatcgtacctggccttcccaaccatgaaagcttaccacaccgtgcgt
attgccatggagttcagagcctcggacacaacaggtatactcctctacaacggccagaat
ggcaggaaggacttcctctctttggctttggtggaaggaaaggtggagctcaggtttaac
acaggttctggaacatgctcggtggtcagcaccgtcacagtaaaacctggtcaatggcat
caattagtggtaagccgtaacagacgcaatggttcactcagtgtcgataatgagaagccg
gttgaaggccagagcccagcaggtactgacggactcaacctggacactgatcttttaatc
ggtggggtgcttgaagagatgatccaagatgtgaaggagaggacctctgtctccaccggt
ttgaccggctgtatccgcctcctggatgtcaacaacatggtgtacaaccttcaggagaac
gggggcaatgtagtgtacggcaaagccgtcggtgaatgcggtaacaacccctgtgtgccc
aacccctgcaaacacggagccttgtgtcaggtgaaaggggctgagatgttccactgcaag
tgcatcaatggtttctcaggtccaacttgcgccgattcgcacaacccgtgtgagccgaac
ccgtgccacccttctgctccgtgccacgtgcttccagagggaggctacaaatgcgagtgc
cccatgggccgcgaaggcaagcactgcagaaaactatctgacaagaggggggcctacatt
cctttcttcagtggcgactcctacctcgagctgaagggcctccatttatacggtcacgat
ctgaggcaaaaggtcagcatgactgtggtcctgctggctaatgattcaaacggcatgatc
ttctacaatggccagaagacagatagcaagggcgatttcatctctcttgcattgaacgat
ggcatcctagagtttcgatatgatctgggcaaagggccagctgtcattaggagtaaagag
aagctcaagctgaatgtgtggaacacggtgaatctggagcgagcaaaccgtaagggagaa
atcactattaacggcaaagacccggtcagaggagaggctccgaaccagcacacagatctc
aatctgaaggaatccctttatgtgggcggagctccggatttccgtaaactggccagacca
gcatcaattaaagctggatttaaaggagccatccagaagattactttgaggggcacgccg
atcctgaagcccgataacgcactgaactccagcgatgtgtccatgtacacacaccaccct
tgttccacatacgtgtgcgagaacggtggcgagtgcaacccgctgctcgagagctacgag
tgtgtgtgtccattcggcttcacgggacccaagtgccagcacactacctacgagaaagca
gccggggagtccgagtccattgcttttgacggccgaacctttatcgaatatcacaacggc
gtcaccaagagtgagaaggccttgctggtgaacaagtttgagctgagcatcaaaactgag
gccactcaaggtctcctcctgtggagtgggaagggcgtggagcgttctgactacatcgcg
ctggccatcgtggatggacgtgtccagatgacctacgacctcggctccaaaccggttgtc
ctgcgatcatcagtgcgggtcaacaccaaccactggatccgcattaaagccagcagggca
ctgagggacggatctttgcaagttggcaatgaggcagcagtaacaggctcctcacctctg
gctgccactcagctggatacagacggtgccctttggctgggtggtcttgaggatatggct
gtggcccgccgccttcccaaggcctacagcactggctttgtgggctgcgtaaaagacgtg
atcgtagacggcgtggatttgcatctagtggaagacgccttaaacagcccgaaaatatta
cactgttcagccaaatag
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