Ictalurus furcatus (blue catfish): 128620526
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Entry
128620526 CDS
T09387
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00280
Valine, leucine and isoleucine degradation
ifu00650
Butanoate metabolism
ifu00900
Terpenoid backbone biosynthesis
ifu01100
Metabolic pathways
ifu03320
PPAR signaling pathway
Module
ifu_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128620526 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
128620526 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128620526 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128620526 (hmgcs1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
128620526 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
128620526
NCBI-ProteinID:
XP_053501569
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All DBs
Position
16:18798336..18811003
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AA seq
556 aa
AA seq
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MFVSPITMPGSVPTSYSDTWPKDVGIIAMEVYIPSQYVDQAELEEFDDVGAGKYTIGLGQ
ARMGFCSDREDINSLCLTVVQRLMERNCLSYDSVGRLEVGTETIIDKSKSVKTVLMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIQAQWQREGLERRFSLKDFGYMVFHSPYCKLVQKSLARLLLNDFLSHPNPDMES
GPFSGLEAFRDVKAEDTYFDRDVEKAFMKASAEMFEQKTKASLLISNQNGNMYTPSVYGC
LASILAQFTPQELAGQRIGLFSYGSGFAATLYSIRVTQDATPGECIHVFTAHTTLWRCLD
VTSHVNVCVLSQGSTLDKLVSSLSDLQARLDSRKKVPPAVFADNMKLREETHHLANYVPQ
GSVDELFPGTWYLTRVDEKHRRYYTRRSLDEHGPLEAGLLNSVTASEHIPSPVKKMPRIP
ATTAVPEAVTITNGEH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaagtccgatcacaatgcctggttctgtccctacgagctattcagacacttgg
cccaaagatgtgggcatcattgctatggaggtctacattccctcccagtatgtagaccag
gcggaactggaggagtttgatgatgttggagcagggaagtacaccatcggtcttgggcaa
gcgcgaatgggtttctgctcagaccgggaggacattaactcgctgtgtctgaccgtggtg
cagcggcttatggagagaaactgcttgtcgtacgacagcgtgggaagactcgaggtgggc
acagagaccatcatcgacaagtcgaagtcggtgaagacggtattaatgcagctgtttgag
gaatccggaaatacagacgtggagggaatcgacaccactaacgcatgctacggaggcacc
gctgctcttttcaacgctgtcaactgggtggagtccagctcctgggacggtcgctacgct
ctggttgtggctggagatatcgcggtgtatgcaacaggcagtgccaggcctacaggaggc
gctggagcagtggccatgttggtagggcctaatgcacctctggcatttgatagaggccta
cgagggacccatatgcagcacgcgtatgatttctataagcctgatatggtgtcagagtat
cccgtagttgatggcaagctctccatccagtgctacctcagtgcattggacagatgttac
tctgtctaccgcaataaaattcaagcccaatggcaaagagagggccttgagagacgtttc
agtctgaaagactttggctacatggtcttccattctccctattgtaaactggttcagaag
tctctggctcgactcctgctcaacgacttcctgtctcatcccaaccccgacatggagagt
gggcctttcagcggcctggaggccttcagggatgtgaaggctgaggacacgtattttgac
cgtgatgtggagaaggccttcatgaaagccagcgcagagatgtttgagcagaaaaccaag
gcctccctgctcatatccaaccagaatggcaacatgtacacaccatctgtgtatggttgt
ctggcttccattctagcacaatttacacctcaggagttggcaggtcagagaattggcttg
ttctcatacggatcaggcttcgctgccacactctactcgatcagagtgacacaagatgct
acacctggtgagtgtatacatgtattcacagcacacacaactttatggagatgccttgac
gtcacaagtcatgtaaacgtgtgtgttttatcccaaggctctacactagataaactggtt
tccagtctgtcagatctgcaggcccgactggactctaggaagaaggttccacctgctgtc
tttgcagacaacatgaagcttagagaggagacccatcacttggcaaactacgtcccccag
ggttcagtggacgagttgttcccaggcacatggtatctaacgcgtgtggatgagaaacac
cgcagatattacactagacgttccctggatgaacacggacctctggaggcaggacttctt
aattccgtgaccgcatccgagcacatccccagcccggtgaagaagatgccccgcatccca
gccactactgctgtccctgaggcagtcactattactaatggggaacattga
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