Ictalurus furcatus (blue catfish): 128620535
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Entry
128620535 CDS
T09387
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128620535
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128620535
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
AGRB_N
BppU_N
Motif
Other DBs
NCBI-GeneID:
128620535
NCBI-ProteinID:
XP_053501646
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Position
16:4182589..4185125
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AA seq
831 aa
AA seq
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MRTQKGRAVAFFRALWLLCVAVLWNEADAQLRYTIAEELKEGSVVGNIAKDLGISVSEIS
ERKLRIESESGKQYFSLDLGDGELIVKDVINRESLCGQSSSCVLPLQIIIEDPLQFYRVE
VEIQDINDNSPRFHADTNVVDVPESTPTGAKFRLEPAQDPDVGSNSIRTYALNKNEHFVL
NIKDNKDGTKIPELVLQIAFDREKQAVHQLILTAIDGGNPVRSGSAEITVRILDNNDNAP
VFDQDLYEIKVMENCAPGTLILTVKANDSDEGTNSEIEYSFGAHTSEAIQNIFTINSGTG
ELTVLKHLDYESSTSYEFDIRARDKGTPVMEGHCRVQVAVVDVNDNAPEIIIASSPKPVR
EDASSGTMVALINVKDLDSGDNGNVTLTMSGNHPFKLKPTFSNHYALVTDAKLDRETFPE
YNIELKACDSGSPPLLTSKIVRVMILDANDNAPVFSMPVYLVYMKENTTPGSILSTVSAS
DLDTGENAKITYSVVGSSQDMPVSSYVYINSDNGSIFSMHSFDYEKMKVFHFQVQAKDHG
SPSLSSNATVHVFIVDLNDNAPTIIYPSALMRSVPHQRMPRSAKAGHLVTKVTAVDADSG
HNAWISYRLAEATDASLFTVTLHTGEVRTKRSVSEQDDSSQRLLIEIKDNGEPLQSTTVT
VDILIEDGFHEPIADFRYKHTEPEKKNSKITLYLIISLASVSLLCLVTFLVLLVKCARSS
RGSSSCCIRRSDCEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEFS
DFTLVKPSSTTDFTNTLSVLDASLPDSTWTFECQQVRNYLNLYLSEDIAYI
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcaaaaaggaagagcggttgcatttttccgggcgctgtggctgctctgtgtc
gctgttttgtggaatgaagcagacgcgcagctccgctacacgattgcagaagagctcaag
gagggttccgttgttggaaatatagcaaaggatctgggtatttctgtatctgagatctcg
gagagaaaattgcgcatagagtctgaatccggtaagcagtatttcagcttggatttagga
gacggcgagctgattgtgaaggatgtaataaacagagagagtctatgcggacaaagcagc
agttgtgtgctcccgctgcaaatcataattgaggatccgcttcagttttaccgcgtggaa
gtcgaaatacaggatataaatgacaactctccacgttttcacgcggacacaaacgtcgta
gacgtgccagagtcgacaccgacaggagctaaatttcgtttagagcctgctcaagacccg
gatgttggctcaaactcgatacggacgtatgcgctaaataaaaacgaacactttgtactt
aacattaaggataacaaagatggaacaaaaatcccggaacttgtgctgcagatagcgttt
gacagggaaaaacaggcggttcatcagcttattctgacagcaatcgatggcggaaatccg
gtcagatcggggagtgctgaaattacagtaaggatactagataacaatgacaatgcccct
gtatttgatcaagatttatatgagattaaagtaatggagaactgcgctccaggtactctg
atattaactgtaaaagcaaatgattcggatgaagggacgaacagtgaaatagagtactca
tttggggcacacacatcagaagctattcaaaatattttcacaatcaattcagggacaggc
gaattaacagtgttaaaacatttggattatgaaagcagtacatcatacgaatttgatata
cgagccagagacaaagggactcctgtcatggaggggcattgtagagttcaggtagcagtt
gtggatgtgaatgataacgctccagaaatcatcatcgcctcctcacctaaacctgtgcga
gaggacgcgtcttctggcaccatggtagcgctgataaacgttaaagatttggattcgggt
gataacggaaacgtaactttgaccatgtccggtaatcaccctttcaaattaaaaccaacg
ttttctaatcattacgcgctggttacagacgcgaaactggatcgagagacgtttccagaa
tataatattgaactcaaagcctgtgactctggatcgccacccttgttaacaagcaaaatt
gtcagagtaatgatattagatgcaaacgacaacgcgcctgttttttcgatgcccgtgtac
ttggtttatatgaaagaaaacaccacaccaggatcaattctatcgactgtatctgcctcg
gatttagacacgggagaaaacgctaagataacctattcagttgttggttcaagtcaagac
atgcctgtctcgtcgtatgtctacattaactcagacaacgggagcatttttagcatgcac
tcgtttgattatgagaagatgaaagtgtttcatttccaagtccaggcgaaagatcacggc
tctccgtctctgagcagcaacgccacggttcatgtttttatcgtggacctgaacgacaac
gcccccactatcatttacccctccgcactcatgcgctctgtgcctcatcagaggatgccc
cgctccgctaaagcaggacacctcgttactaaagtcacagcagtggacgctgactcaggt
cataacgcctggatttcctatcggctagcggaggccacggacgcgtctctgttcactgtc
actttacatacaggagaggtgaggactaagcgctctgtttcagagcaggacgactcctct
cagagactgctcatagagataaaggacaacggagaaccgctgcagtccaccacagtcact
gtggatatactgatagaggacggctttcatgaaccaatcgcagactttagatacaaacac
acagaacctgagaagaaaaatagcaaaatcacattatatctcatcatttctcttgcctcc
gtgtcattgttgtgtttggtgacatttttggtcttgttggtaaaatgcgctcgaagcagt
agaggcagctcgagctgctgtatcagacggagcgattgtgaatataaaaaccccaacaga
aacctgcagatccagctcaacactgacggacccattaaatatgtggaggtgctgggagga
gacatgatgtctcagagtcagtccttcggctcgtatctctctccaatgtccgaattcagt
gatttcaccctcgttaagcccagcagcaccacagactttacaaacactctgagcgtgctc
gatgcgtctttaccggacagcacatggacgtttgagtgtcagcaggtgagaaattattta
aatttatatctgagcgaagacatagcctacatctga
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