Ictalurus furcatus (blue catfish): 128620537
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Entry
128620537 CDS
T09387
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128620537
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128620537
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
BppU_N
AGRB_N
Motif
Other DBs
NCBI-GeneID:
128620537
NCBI-ProteinID:
XP_053501649
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Position
16:4178579..4181529
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AA seq
825 aa
AA seq
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MGIMSFFKRKIYCCYFILMWNTIEAHVRYVIPEELRGGSVVGNIAKDLGLDLSEVAGRKL
RIASESGKQYFSVAADSGELLVNERIDRESLCGHTVPCLLPLEAVVENPLQLHRVEIDIQ
DINDNTPSFNTDRRILNIPESINPGAKFLLESADDPDVGSNSLQSYTLGSNKYFVLNVKT
QDGIKIPELVLDKPLDREKQATHRLILTAVDGGKPARSGTCEVNIIVVDNNDNAPQFEKS
FYEANIAENELIGNDIIKVSAVDLDEGANGEIEYVFADKTSDALKAVFDINPTTGVINVK
GKLDFEQANLYKFDVMAKDKGNPQMEGHCSVKIMISDINDNAPEIVITSLSSPVPENSPN
NTVIALISTKDSDSGENGKVNLTVASGSPFTLNPSLSNRYTLVTNGALDREKYPEYEIKL
NAVDSGLPALHAEKIVKISISDVNDNPPVFSQKSYTVYTRENTAHGSILCSVLAHDPDLD
QNAKISYSILDSKVQDVSVSSYIYINSDNGSIYTMHSFDYEKMKVFHFQVQAKDHGSPSL
SSNATVHVFIVDQNDNAPAVIYPSALMGSVSHQRMPRSAKAGHLVTKVTAVDADSGHNAW
ISYRLAEATDASLFTVTLHTGEVRTKRSVSEQDDSSQRLLIEIKDNGEPLQSTTVTVDIL
IEDGFHEPIADFRHKHTEPEKKNSKITLYLIISLASVSLLCLVTFLVLLVKCARSSRGSS
SCCIRRSDCEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEFSDFTL
VKPSSTTDFTNTLSVLDASLPDSTWTFECQQVSGKFCLFLSSLVL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgggaattatgtcgtttttcaagaggaagatatactgctgttatttcatccttatgtgg
aatacaatagaggcgcatgtccgctatgtcatcccagaggagctaaggggaggatcggtg
gtgggaaatatcgcaaaagaccttggtttggatttatccgaggttgcaggtcgtaaattg
cgaatagcctccgagtcgggtaagcagtacttcagtgtggccgcggatagcggcgagctt
ctggtgaatgaaagaattgatagagagagtctttgtgggcacacagtgccgtgtttactg
cctctggaagcagttgtagaaaatcctctgcagttacatcgcgttgagattgacatacaa
gacattaatgacaacactccgagttttaatactgatcggcgtattttaaatattcccgag
tctataaaccctggcgcaaaatttctcctcgagagcgcggacgatcctgatgtcggatca
aattctttgcaatcgtatactctgggaagcaataaatattttgtgttaaatgtgaaaact
caagatggcataaaaatcccggagttagtactggacaaaccgctcgatcgagaaaagcag
gctactcatagacttatactgacggcggtagacggcggaaaaccggcgagatctggcaca
tgtgaagtcaatatcatagttgttgataataatgacaacgcaccccaatttgagaagtct
ttttatgaagctaacatcgctgaaaatgaacttattggaaacgacattatcaaggttagc
gctgtagatttagacgagggagcaaatggagaaatcgagtacgtttttgcggacaaaaca
tctgatgcactaaaggctgtttttgatattaacccgactacaggtgtgattaatgtaaaa
gggaaactcgattttgaacaagcaaatttatacaaattcgacgtaatggccaaagacaaa
ggaaacccacagatggaagggcactgtagtgtaaaaataatgatcagtgacataaatgac
aacgctccagaaatagtcattacatctctctccagcccagtgcccgaaaattccccgaat
aacacagtcattgctctaattagcactaaagattccgattctggtgaaaatggaaaagtg
aatcttacagtggcatccggttcaccatttacactgaacccttctctatctaatcgttac
acactggttactaatggtgcactagatcgagagaaatatcctgagtatgagatcaaatta
aatgcagttgattcaggtttaccagctctgcatgcagaaaaaattgtaaaaattagtatc
tctgatgtaaacgataatcctcctgttttctctcaaaagtcgtatacagtttacacgaga
gaaaatactgctcacgggtcaattctgtgttccgtattagcacatgatccggatcttgac
caaaatgccaaaatctcctactccattttggactctaaagttcaagatgtttccgtctca
tcgtacatctatattaactcggataatggcagcatttacactatgcactcattcgattat
gagaagatgaaagtgtttcatttccaagtccaggcgaaagatcacggctctccgtctctg
agcagcaacgccacggttcatgtttttattgtggaccagaacgacaacgcccccgctgtc
atttacccctccgcactcatgggctccgtgtctcatcagagaatgccccgctccgctaaa
gcaggacacctcgttactaaagtcacagcagtggacgctgactcgggccataacgcctgg
atttcctatcggctagcggaggccacggacgcgtctctgttcactgtcactttacataca
ggagaggtgaggactaagcgctctgtttcagagcaggacgactcctctcagagactgctc
atagagataaaggacaacggagaaccgctgcagtccaccacagtcactgtggatatactg
atagaggacggctttcatgaaccaatcgcagactttagacacaaacacacagaacctgag
aagaaaaatagcaaaatcacattatatctcatcatttctcttgcctccgtgtcattgttg
tgtttggtgacatttttggtcttgttggtaaaatgcgctcgaagcagtagaggcagctcg
agttgctgtatcagacggagcgattgtgaatataaaaaccccaacagaaacctgcagatc
cagctcaacactgacggacccattaaatatgtggaggtgctgggaggagacatgatgtct
cagagtcagtccttcggctcgtatctctctccaatgtccgaattcagtgatttcaccctc
gttaagcccagcagcaccacagactttacaaacactctgagcgtgctcgatgcgtcttta
ccggacagcacgtggacgtttgagtgtcagcaggtgagcggtaaattttgtttattttta
tcttcattagtgttataa
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