Ictalurus furcatus (blue catfish): 128620540
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Entry
128620540 CDS
T09387
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128620540
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128620540
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
AGRB_N
BppU_N
Motif
Other DBs
NCBI-GeneID:
128620540
NCBI-ProteinID:
XP_053501652
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Position
16:4190135..4193137
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AA seq
812 aa
AA seq
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MRRKCWIAGLLYAFAVWNITKAQIRYTIPEEQNEGTVVGNIAKDLDLQLSDAFERNLRIA
VESGKQYFGVDPTKGELVVKERIDRENLCPQSATCILPLEAITENPLQLHRFEIEIQDIN
DNSPVFQNKENTLNIAESIAPGARFRLESAQDPDVGSNSLRTYTLSKNEYFVLDVKLAKD
GSRVPELVLEKSLDREKQSIVSLTLTALDGGKPARSGTTKISVRVLDTNDNAPVFEKPQY
DEQITENTAPGVVVLTVRAIDLDEGANKEMSYSFGPHTPDTLSYLFSVDPGTGEIKVKNK
IDYETDRSFDFDIVARDKGNPPMEGVCSVHLDILDMNDNAPEIILKSSPSPVREDAPAGT
VVALISAKDLDKGDNGQVTLTLLPGTPFSLKTSLSNHYTLITDQKLDREAHSAYTVVIVA
ADSGSPQLTSQQEILVKVLDVNDNAPVFTQTSYVAHVKENSAAGSILCSVSASDPDQGEN
AKISYSILDSRVLDAPLSSYIYINSDNGSIFSMHSFDHEKVKVFQIQVQAKDHGSPSLSS
NATVHVFIVDQNDNAPAVIYPSALMGSVSHQRMPRSAKAGHLVTKVTAVDADSGHNAWIS
YRLAEATDASLFTVTLHTGEVRTKRSVSEQDDSSQRLLIEIKDNGEPLQSTTITVDILIE
DGFHEPIADFRHKHTEPEKKNSKITLYLIISLASVSLLCLVTFLVLLVKCARSSRGSSSC
CIRRSDCEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPVSEFSDFTLVK
PSSTTDFTNTLSVLDASLPDSTWTFECQQVRV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaaaatgctggattgccgggctgctctatgcgttcgctgtgtggaatattacc
aaggcgcagattcgctacacaataccagaggagcaaaacgagggcactgtggttggaaat
atcgccaaagacctggatttacaattatctgacgcgtttgaacggaatttgcggattgct
gtcgagtctggtaagcagtatttcggcgtggatccaacaaagggtgaactggttgtgaag
gagagaattgacagggagaatttatgccctcaaagtgctacatgcattcttcctttggag
gctattaccgaaaatcctttgcaattgcaccgatttgaaatagaaattcaggacattaat
gacaattctccagttttccaaaataaagaaaacactttgaatatagccgagtcaatcgct
cctggtgcaaggtttcgtttagaatcagcccaggatccagatgtgggatcaaattcactg
cgaacttacacactgagcaaaaatgagtattttgtactagatgtgaaactagctaaagat
ggatctcgtgtgccagagcttgttttagaaaaatctttggacagagaaaaacagtcaata
gtcagtctcacgcttactgctttagatggtggaaaacctgcaagatccggcacaacaaaa
atctccgttcgtgtacttgacacaaatgataacgctccagtttttgaaaaacctcaatat
gacgagcaaatcacagaaaacacggccccaggagtggttgtgcttaccgtaagagctata
gatctagatgaaggcgcaaacaaagaaatgagctattcgtttggtcctcacacaccagac
acgctaagctatttgttttctgttgatccaggtactggcgagattaaggtaaaaaataag
atagattacgagacagacaggtcctttgattttgatattgtagccagagacaaaggcaat
cccccaatggagggcgtgtgtagtgtccatttggatatattagatatgaacgataatgca
ccagagatcatattaaaatcttcacccagtcctgtccgggaagacgctcctgctggcaca
gtagtagctttaataagtgccaaagacttagacaaaggtgataatggtcaggttactttg
actttattacctggaacgccattttccttaaaaacatctttatcaaatcattacacgtta
atcacagatcagaaactggacagagaagcgcactctgcatatactgttgtgattgttgct
gctgattcaggatcaccacagctcacgtctcagcaagaaatactcgtaaaggttttagat
gtaaacgataacgcacctgtttttacgcaaacatcatacgttgcccacgttaaagaaaac
agcgctgctggatcaatattatgttcggtgtcggcttctgatccagatcagggagaaaat
gctaaaatttcttattcgattttagactctagagtactcgacgcaccactgtcatcttat
atctatataaattcagacaacgggagcatttttagcatgcactcatttgatcacgaaaag
gtgaaagtatttcagatccaagtccaagcgaaagatcacggctctccgtctctgagcagc
aatgccacggtacatgtttttattgtggaccagaacgacaacgcccccgctgtcatttac
ccctccgcactcatgggctccgtgtctcatcagagaatgccccgctccgctaaagcagga
cacctcgttactaaagtcacagcagtggacgctgactcgggccataacgcctggatttcc
tatcggctagcggaggccacggacgcgtctctgttcactgtcactttacatacaggagag
gtgaggactaagcgctctgtttcagagcaggacgattcctctcagagactgctcatagag
ataaaggacaacggagaaccgctgcagtccaccacaatcactgtggatatactgatagag
gacggctttcatgaaccaatcgcagactttagacacaaacacacagaacctgagaagaaa
aatagcaaaatcacattatatctcatcatttctcttgcctccgtgtcattgttgtgtttg
gtgacatttttggtcttgttggtaaaatgcgctcgaagcagtagaggcagctcgagctgc
tgtatcagacggagcgattgtgaatataaaaaccccaacagaaacctgcagatccagctc
aacactgacggacccattaaatatgtggaggtgctgggaggagacatgatgtctcagagt
cagtccttcggctcgtatctctctccagtgtccgaattcagtgatttcaccctcgttaag
cccagcagcaccacagactttacaaacactctgagcgtgctggatgcgtctttaccggac
agcacgtggacgtttgagtgtcagcaggtgagagtgtga
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