KEGG   Ictalurus furcatus (blue catfish): 128622163
Entry
128622163         CDS       T09387                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1-like isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03420  Nucleotide excision repair
ifu04110  Cell cycle
ifu04114  Oocyte meiosis
ifu04120  Ubiquitin mediated proteolysis
ifu04141  Protein processing in endoplasmic reticulum
ifu04310  Wnt signaling pathway
ifu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128622163
   04120 Ubiquitin mediated proteolysis
    128622163
  09124 Replication and repair
   03420 Nucleotide excision repair
    128622163
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128622163
   04350 TGF-beta signaling pathway
    128622163
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128622163
   04114 Oocyte meiosis
    128622163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ifu04121]
    128622163
   03400 DNA repair and recombination proteins [BR:ifu03400]
    128622163
Enzymes [BR:ifu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     128622163
Ubiquitin system [BR:ifu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   128622163
  Multi subunit type E3
   SCF complex
    Ring finger protein
     128622163
   Cul2 complex
     128622163
   Cul3 complex
     128622163
   Cul4 complex
     128622163
   Cul7 complex
     128622163
   Cul8 complex
     128622163
   Cul9 complex
     128622163
DNA repair and recombination proteins [BR:ifu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128622163
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128622163
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16 PHD_NSD
Other DBs
NCBI-GeneID: 128622163
NCBI-ProteinID: XP_053504419
LinkDB
Position
18:13929268..13931961
AA seq 108 aa
MAATMDVDTPSGTNSGACKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNNEWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccacgatggatgtcgacaccccgagcgggacaaacagcggcgcctgtaagaag
cgttttgaagtcaaaaagtggaatgcagtagctctgtgggcttgggacatcgtggtggat
aactgtgccatctgcagaaaccacatcatggacctgtgtatagagtgtcaggccaatcag
gcttctgccacatcagaggagtgcacagtggcctggggagtgtgtaatcatgcatttcat
ttccactgcatctcccgctggctaaagacgcggcaggtgtgtcctctggacaacaatgaa
tgggagttccagaagtacggacactga

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