Ictalurus furcatus (blue catfish): 128622184
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Entry
128622184 CDS
T09387
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04110
Cell cycle
ifu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128622184 (rb1)
04218 Cellular senescence
128622184 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128622184 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128622184 (rb1)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128622184 (rb1)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
128622184 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
128622184
NCBI-ProteinID:
XP_053504463
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All DBs
Position
18:17593285..17639743
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AA seq
900 aa
AA seq
DB search
MPPKKRSSNTPPSREAKWGNKKENSVLSPEKHKEKDPEFVALCKDLSVSNLVCTQAWTLW
EAMAKTAEKVTESNKQLWGACVYMSAVDLDDIGFTFTEFQKAVGLSVKQFLSLVRKLDEI
LDTISPKVNSAVTRLEKKYEVSLALYQRFVKTCAKIYMVSEEVKRRELLRCSWILFLLAK
GSVLQMEDDLVIAFQLLLCVLEFYIKRCPSSLLQPLYKSAISETTQSPPTRTSRRNKANK
SRPCEMDMQLLEMLCKESDCSVDEVKNVYQSSFCAFLESMSLSGSQELPAVETLSKSYEE
LYHKSKDFDARLFLTDDETLSPIKTEATNVEMTPRKNPSGEESVSIPQQTPIRAAMYSIQ
QLRGELTSISDQPSGILMVYFKNCTVDPSEDITKRVDQFGQIFSQKFAQAVGQRCEGLGK
KRFTLGVQLYYKVMESMLKSEEKRLSVQNFSKLLNNATFHTSLLACALEVVLATYVGYSL
KNGGSESPETNLCFPWILDVFQLHAFDVYKVIESFIKAEPTLKHDMIEHLGRCEQQIMES
IAWKSDSLLFELLRQSREDGTGEQAEPPATLNQPLQHNHTAADLYLSPPRPSRRVSAAAV
VSEVDIPALPPSQPPAPGTKQHRSNSLSLFYKKLYRMAYLRLKMLFSHLLTSHPELEAII
WTLLQHTLQNEYELMKDRHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETFK
RVLIRDGQYDSIIVFYNLVFMQKLKTNILQYASSRPPPLSPIPHIPRSPYNYPSSPLRVP
GGNVYISPLKSSHLTPAAMTPRSRILVSIGESFGTSDKFQKINQMVSSTDWPLKRRLAGD
SNPKPLKWLRFDVDGQDEADGSKSSGESTLNKKLAEMRSVQNLMQEQKMKEEAEKEDPEP
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaagcgcagcagcaacactcctccgagccgagaggcgaagtggggcaac
aagaaggagaactcggtgctctctccggaaaagcacaaagagaaagatccagagtttgta
gctctttgtaaggacctctcagtctccaacttggtgtgtactcaggcgtggaccctgtgg
gaggcgatggccaaaacggcagagaaagtcacagaatcaaacaagcagctgtggggagca
tgtgtgtacatgtcagcagtggacttggacgacatcgggttcacctttacagaatttcag
aaggctgttggtctgagcgtgaagcagtttctctccctggtgcgaaagctggacgaaatc
ttggacacgataagccctaaagtaaactcggctgtgacgaggcttgagaagaaatacgag
gtgtcgctggctctctatcagagatttgtgaaaacatgtgcaaaaatctatatggtgtct
gaagaagttaagagacgagagcttttgcgctgtagctggatcttattcctcttggctaaa
ggaagtgttctgcaaatggaggatgacctggtgatagccttccagttacttttgtgtgtt
ttggagttctacatcaagcgctgcccatcctctctcctccagcctctctacaagtcggca
atcagcgagacgacacagagccctccgactcggacctcaaggcggaacaaagccaacaaa
tcccgtccttgcgagatggacatgcagttgctggagatgctgtgtaaggagagtgactgc
agtgtagatgaggtgaagaacgtctaccaaagcagtttctgtgccttcctggagtccatg
agcttgtcaggatcacaggagcttcctgcagtggaaacactatccaaaagttatgaagag
ctctaccataaaagcaaggactttgacgcacgactgttcttaactgacgacgagaccctc
agcccaatcaaaacagaagctacaaatgtagaaatgactcctagaaagaatccatctgga
gaggagagtgtctccattcctcaacagaccccaatcagagctgcaatgtattcaatccag
cagctgaggggtgagcttacctcaatcagtgaccaaccttcaggcattctcatggtttac
ttcaagaactgcactgtggacccatcagaagacatcacgaagcgggttgaccaattcggt
cagatcttcagccagaaatttgctcaagctgttggtcagcgctgtgaaggattgggcaag
aagagatttactctaggtgtccagctttactacaaagtcatggagtcgatgcttaagtcg
gaagagaagagactctcggtgcaaaatttcagtaaactcctgaacaatgctactttccac
acttcactccttgcctgtgcactggaagttgtcctggcaacatatgttggatattccctg
aagaatggcggcagcgaatctcccgaaacgaacctgtgcttcccctggatcttggacgtc
ttccagcttcacgcctttgacgtctacaaagtgatagaaagtttcatcaaggcggagccc
actctgaagcacgacatgatcgagcacttgggccgctgtgagcagcagatcatggagagc
attgcgtggaaatcggattctctcctgttcgagctcctgaggcagtctcgtgaagatggt
accggagagcaagcggagcctcctgcaacgctgaatcagcctctacagcacaatcacacg
gcagctgatctatatctgtctcctccgcgtccgagtcgtcgagtttcagcagcagcagta
gtatcagaggttgacattccagccctgcccccatcacagccccctgccccaggcaccaaa
cagcaccgctccaactccctcagcctcttctataagaaattatacagaatggcctacctg
cgactgaaaatgcttttctctcaccttctcacctctcaccccgagctggaggccatcata
tggactctgctccagcacacactccagaacgagtatgagctaatgaaggacagacaccta
gaccagctgatgatgtctgccatgtacgccatatgcaaggtgaagaatgtggatttgcgc
ttcaagacgattgtcactgcgtacaaagagcttcccaacacaaaccaggagactttcaag
cgtgtgttgatcagagatggccaatacgattccatcatcgtcttctacaacctggtgttt
atgcagaagttaaagacgaacatcctgcagtacgcgtcttcccggcctcctccactttct
cccattccacatattccccggagcccgtacaattatcccagctccccccttagagtgcct
ggagggaacgtctacatctcccctttaaagagcagtcatttgaccccagcagccatgacg
ccccggtccaggatccttgtatccattggcgaatcattcgggacctctgacaagttccag
aagatcaatcagatggtcagtagcacagattggcccctgaagaggaggctagccggagac
tccaaccccaaacccttgaagtggttacgtttcgatgtggatggacaggatgaggctgat
gggagcaaatcaagtggcgagtctacactgaacaagaagctggctgagatgcgttcagtt
caaaatctaatgcaggaacagaaaatgaaggaggaggctgagaaggaagacccagaaccc
tga
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