KEGG   Ictalurus furcatus (blue catfish): 128623985
Entry
128623985         CDS       T09387                                 
Name
(RefSeq) tropomyosin alpha-4 chain isoform X1
  KO
K09290  tropomyosin 3
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04260  Cardiac muscle contraction
ifu04261  Adrenergic signaling in cardiomyocytes
ifu04814  Motor proteins
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    128623985
   04820 Cytoskeleton in muscle cells
    128623985
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    128623985
   04261 Adrenergic signaling in cardiomyocytes
    128623985
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ifu04812]
    128623985
Cytoskeleton proteins [BR:ifu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     128623985
SSDB
Motif
Pfam: Tropomyosin Laminin_II XhlA TMF_DNA_bd CALCOCO1 TMP_N DUF3450 DUF745 DUF16 PUMA_CC CLZ ERM_helical DUF1664 Crescentin HR1 KH_DEAH11_2nd CENP-F_leu_zip WS_DGAT_cat Lebercilin FlaC_arch
Other DBs
NCBI-GeneID: 128623985
NCBI-ProteinID: XP_053507198
LinkDB
Position
20:complement(3476270..3492797)
AA seq 248 aa
MAGVNSVEAVKRKIKVLQQQADEAEERAEVLQRQVEEEKRSREQAEADVASLNRRIQLVE
EELDRAQERLTTALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEVQLKEAKHIAE
EADRKYEEVARKLVIIEGDLERTEERAEVAEAKSAELEEELRNVTNTLKSLEAQTEKYSQ
KEDKYEEEIKILTDKLKEAETRAEFAERSVTKLEKTIDDLEERLATAKEENLKIHATLDA
TLQDLNNF
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccggagtgaacagtgtagaagcggtgaagcgcaagattaaagttctgcagcaacag
gcggatgaggccgaggagagagccgaggtcctgcagagacaggtcgaagaagaaaaacgc
tcaagggagcaggccgaggcggacgtcgcttctctgaacaggcgcatccagctggttgaa
gaggagctggatcgagctcaggagagactcaccacagctttgcagaaactggaggaggca
gagaaggctgcagatgagagtgagaggggcatgaaggtgattgagaacagggccctgaag
gatgaggaaaagatggagctgcaggaggtccagctgaaggaggccaagcacattgcggag
gaagctgaccgcaaatacgaggaggtggctcgtaagcttgtcatcatcgagggtgatttg
gagcgcacagaggagcgagcagaagttgctgaggccaaaagtgcggaattggaggaggag
ctgagaaatgtcaccaataccttaaagtccttggaggcccaaactgagaagtattcccag
aaagaggacaagtacgaggaagagatcaagattctcacggataagctgaaggaggctgag
acccgcgccgagttcgccgaaagatcagtgaccaaactcgagaagacgattgacgatttg
gaagagaggctcgccaccgctaaagaggagaacctcaagatccacgccacgctggacgcc
actctgcaggatctcaacaacttctaa

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