Ictalurus furcatus (blue catfish): 128624017
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Entry
128624017 CDS
T09387
Symbol
ptprfb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
ifu04520
Adherens junction
ifu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128624017 (ptprfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128624017 (ptprfb)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128624017 (ptprfb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128624017 (ptprfb)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128624017 (ptprfb)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128624017 (ptprfb)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128624017 (ptprfb)
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
Type II RPTP family
128624017 (ptprfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_ELFN
DUF6548
Fn3_PTPRU
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128624017
NCBI-ProteinID:
XP_053507251
LinkDB
All DBs
Position
20:complement(22428076..22591596)
Genome browser
AA seq
1922 aa
AA seq
DB search
MVPHICPSVPLTPRWLSVLLLLGCTAFPSHADSLPSFIKTPEDQTGISGGVASFVCQAVG
EPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEINT
SAKLTVLEENQIPAGFPSIDMGPQLKVVERTRIATMLCAASGNPDPEISWFKDFLPVDIN
SSSGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPPRFSIPP
SDQEVMPGGSTNLTCVAVGAPMPYVKWMTGEVELTKEDEMPIGRNVLELTNIRKSANYTC
VAMSSLGMIEATAQVTVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSYYMIQYRSKA
SDSSYQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDAVETRTSEQAPSSPPL
HVQARMLSSSTMLVQWEPPEEPNGQIRGYRIYYTTDPELQLSAWLKHNTDDSRLTTISGL
TTNITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSGFEAEAEPDARIMLKWLWPVQE
PITLYELHYWEDGSDNKIRVTFIPAGSYAVEGLKPDTLYKFSLAARSEMGLGVFTKPIEV
RTAQSTPSAPPQDVQVLSLSSTSIKVSWVPPPAASRHGAIVRYTVSYQAVSGEDTERHEV
TDIGADATGVVLEGLGKWTEYVVRVRAHTDVGPGPESAPVRIRTNEDVPGAPPRKLEVEA
VNSTAIRVTWKPPLSGKQHGQIRGYQVIYSRLENGEPRGQPNIMDVALPEAQWNIEDTTE
YEAIISGLISETSYSVTVAAYTTRGDGARSKAKVIKTTGAVPGKPTMHISITVGNTALIQ
WQPPKDMPGELIGYRLRYKRADEETFAVHNFGSTDDHYTATGLFKGATYSFHLSAKNRAG
TGEEFVKNISTQEEVPSGFPLNLSVVGLTTTTTRLTWAPPAPAERNGRITHYIVVYRDIN
SQQNSTNRTADTHMTLHSLRPDTTYDIRIQAFNSKGGGPISPSIQSRTMATSPAFATSFG
VKAVMKTSVLLTWELPENFKSQGLFKILYNQQSVEVQGNMKRKLITGLKPDTNYSFVLMS
RGNSAGGLQQQVSIRTAPDLLKTKPVLFRTDENNGGKITINLPKVVTTAPISWYYIVVVP
GSLMSSRRWENPDEMELDELLEVSRVSLQRHRRRRRYTESQRPYIAAKLEYLPEMFTLGD
EQNYNGFYNRLVPRDQPYQCFVMAEMKEQHLSNANEKQRVFSSSPYSDPVMVENGSVAHS
VESPEMLWVMGPVLAVVLIVSIVIAIILFKRKRASPLPKDEHLSGVKDSLLANSSDPVEM
RRINYQTPGPSTSCCPDTPRMREHPPISVCELADHIERLKANDSLRFSQEYESIDPGQQF
TWENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTNTIIMMTRLEEKSRVKCDQYWPVRGTETYGMIQVTMLDTVEL
ATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMV
VHCSAGVGRTGCLIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGVTEVPARNLYTHIQKLSQPPPGDTVSSMELEFKRLANSRAHTSRFISANLPCNK
FKNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctcatatttgcccctcagtgcccttgacgcctcgctggctttctgtcctgctt
ctgctcggctgcacggcctttccctcccacgccgacagtttgccgagcttcatcaagact
ccggaggaccagacggggatttcaggtggcgtggcgtctttcgtgtgccaggcggtcgga
gaacccaagcctcgcatcacctggatgaagaaagggaagaaagtcagctctcagcgcttt
gaggtgatcgagttcgacgatggctcgggctccgtcctgcggatccagcccctgcgcacg
caccgagacgaggccatttacgagtgtacggccaccaacagcgccggggaaatcaacacc
agcgccaaactgaccgtgctggaagagaatcagattcctgccggtttcccgagcatcgat
atgggtcctcagctcaaagtggtggagcgaacgcggatcgctaccatgctgtgtgccgct
agcggaaaccccgatccggaaatttcctggtttaaggacttccttcccgtcgacatcaac
agcagcagcggacggataaagcagcttcgctcaggagctctgcagatcgagaacagtgaa
gagtcagaccagggaaaatacgaatgtgtggcgacgaacagcgctgggacgcgttactcc
gcccccgccaacctctatgtccgagtacggcgggtgccaccccgtttctccatcccgccc
agcgatcaggaggtgatgccggggggcagcactaatctcacctgcgttgccgtcggagcc
ccgatgccctacgtcaagtggatgactggagaagtcgagctcaccaaagaagatgaaatg
cccatagggcgcaacgttctggagcttaccaacatccgcaagtcggctaactacacctgc
gtggccatgtcttctctggggatgatcgaagccacggcgcaagttacagtcaaagctctc
cccaaaccccccacgtctctgactgtaacggaaacgacggccaccagcgtcaccctgacg
tgggactctgggaacccggaacccgtctcctattacatgatccaatatcgctccaaagcc
tccgacagcagctaccaggaagtggacggcgttgccacgacgcgctacagcatcggcggg
ttgagcccgtactcggagtacgagttccgcgtcatggcggtgaacaacatcgggcgcggt
ccaccgagcgacgccgtggagacccgcaccagcgaacaggctccttcgtctcctccactg
cacgtgcaggcgcgcatgctgagctctagcaccatgttggtgcagtgggaacctccggag
gaacccaacgggcagatccgtggatatcgcatctattacacgaccgatccggagctgcag
cttagcgcctggctgaagcacaacaccgacgacagccgactgaccacaatctctggatta
accaccaacatcacgtacagtctccgcgtcctgggcttcacttccgtaggagacggacct
ccgtcggatgtcctgcaggtcaaaacgcagcaaggagtcccggcacagccttccgggttc
gaggccgaagccgaacccgacgccaggattatgctgaagtggctttggcccgttcaagaa
ccgatcactttatacgagctacattactgggaggacggatcagacaataagattcgtgtc
accttcatcccggctgggtcgtacgccgtggaaggcctgaagccagacactctgtataag
ttctcccttgccgcccgctccgaaatgggcctgggggtcttcacgaagcccatcgaagtc
aggaccgctcagtccaccccctcagctccacctcaggacgttcaggtgctcagtctgagc
tccactagcattaaggtgagttgggtgccgcctcctgctgccagcaggcacggcgctatc
gttcgctacaccgtgagctaccaggcggtgagtggcgaggacaccgagcggcacgaggtg
acggatatcggagcggacgccaccggtgttgtactagaggggttggggaagtggacggag
tacgtggtgcgggtgagggctcacaccgacgtggggcccgggcctgagagcgcacctgta
cgcatccgaaccaacgaggatgtgcctggagctcctcctcgtaagttggaggtcgaagct
gtaaactcgacggctatccgtgtgacgtggaagccgccgctctcgggaaagcagcacggt
cagatccgaggatatcaggtgatttattcccggctggagaacggggaaccacgagggcaa
ccgaacatcatggacgtagcgctgcctgaagcccaatggaacattgaggacaccaccgaa
tatgaagccatcatctctggcctgatctcggagacgtcgtactcggttacggtagcggcg
tacaccaccagaggagacggagcacgcagcaaagccaaggtcatcaaaaccacaggagca
gttcctggcaagcccaccatgcacattagcatcacagtgggcaacaccgccctcatccaa
tggcagcctccgaaagacatgccgggcgagctgatcggctaccgtctacgctacaagcgc
gcggacgaggaaacgttcgcagtgcataacttcgggagcacggacgaccactacacggcg
acgggcctcttcaagggcgccacctacagcttccacttgagcgccaagaaccgcgcaggc
accggagaagagttcgtgaagaacatcagcacgcaggaggaagttccaagcgggttcccg
ctgaacttgagcgtggtgggactgaccaccacgaccacccggcttacgtgggcgccgccg
gccccggcggagcggaacggacggatcactcattacatcgtcgtttacagagatatcaac
agccagcagaacagcaccaatcgtacggcggacacgcacatgacgctgcacagcctgcga
cctgacaccacctacgacatccgcatccaggctttcaacagcaaggggggtggacccata
agccccagcatccagagcaggaccatggccacgtcaccagctttcgcaacgagttttggc
gtcaaagcggtaatgaagacatccgtccttctgacctgggagcttcccgagaacttcaag
tctcaagggcttttcaagattttgtacaatcagcagagcgtggaggttcagggcaacatg
aagaggaagctaatcacaggcctgaagcccgacactaattactccttcgtgttaatgagt
cgagggaacagcgctggaggactgcagcaacaggtctccatccgaaccgctccggacctc
ctcaaaaccaaacccgtcctcttcagaaccgacgagaacaacggaggaaaaatcaccatc
aaccttcccaaagtggtgacgacagcaccgatcagttggtattacatcgtggtcgtgccg
ggttcgctgatgtcatcacgcaggtgggaaaatccagatgaaatggaacttgatgagctt
ctcgaggtcagcagagtttccctgcagaggcaccggcggcgtcggcgttacactgaaagt
cagagaccgtacatcgccgccaagctggaataccttcccgagatgttcacgctcggagac
gagcaaaactacaatggcttctacaaccgcctggtgcctagggaccagccgtaccagtgc
ttcgtcatggccgagatgaaggagcagcacctttccaatgccaacgagaagcagcgcgtt
ttctcctccagcccgtactcggacccggtgatggtggagaacggcagcgtggctcacagc
gtggaatctcccgagatgttgtgggtgatggggccggtcctcgccgtggtgctcatcgtc
agcatcgtcatcgccatcatcctgttcaaaaggaagcgagcatctccgttgcctaaagac
gaacatttgagcggggtgaaggactccctactggcgaactcgtccgatcccgtggaaatg
aggagaatcaactatcagacgccaggtcccagcacctcctgctgccccgacactccaaga
atgagagagcatcctcccatctccgtgtgtgagctggccgaccacatcgagcgcctcaaa
gccaacgacagcctgcgtttctcacaggagtacgagtccatcgatcccggtcagcagttc
acctgggagaactcgaacatggaggtgaacaaaccgaaaaaccgctacgctaacgtcatc
gcctacgatcactcccgagtcgtgctgacctccgtggacgctgttccaggtagcgactac
atcaacgccaactacatcgacggctaccgtaagcagaacgcctacatcgccacgcagggc
cctctgcccgagacgctcagcgatttctggaggatggtgtgggagcagaggaccaacacc
atcatcatgatgaccagactggaggagaaatcacgggtgaagtgtgaccagtactggccg
gtacgtggaacagaaacgtacggaatgatccaggtgaccatgttggatacggtggagctg
gcgacgtacagcgtgcgcacgtttgcactttataagaacggctccagtgagaagagagag
gtgagacagttccagttcatggcgtggccggatcacggcgtgcccgagtaccctacgccc
atcctggccttcctgcgaagggttaaagcatgtaaccctcctgacgccgggcccatggtg
gtgcactgcagtgccggcgtgggtcgcaccggctgcctcatcgtgatcgacgccatgctg
gagcgcatgaagcacgagaagacggtggacatttacggccacgtgacgtgcatgcgctct
cagaggaactacatggtgcagacggaggatcaatacatcttcatccacgaggcgctgctg
gaggcggcgacctgcggcgtcaccgaggtcccggcacgaaacctctacacacacatccaa
aaactgagccagcccccgcccggagacaccgtcagctccatggagctcgagtttaagagg
ctggccaactccagagctcacacatcacgcttcatcagcgccaacctgccgtgcaacaag
ttcaagaaccgactggtgaacatcatgccgttcgagtcgacgcgtgtgtgtctgcagcca
atcagaggcgtggaggggtccgactacatcaacgccagctgcatcgatggttacaggcag
cagaaagcgtacatcgccactcagggtcctctggccgagaccacggaggatttctggagg
atgctgtgggagcacaactccaccatcgtggtgatgctgaccaaactccgcgagatggga
cgggagaagtgtcatcagtactggccggccgagcgctccgcccgttatcagtacttcgtg
gtcgaccccatggctgagtacaacatgcctcagtacatcctgcgagagtttaaagtcacc
gacgccagggacggccaatcgcggacgatccgccagttccagttcaccgattggccggag
cagggcgtgccgaagacgggcgagggattcatcgatttcattggccaagtgcataaaacc
aaggagcagttcggtcaggacggaccaatcactgtgcactgcagtgcgggagtgggcagg
accggggtgttcatcactctcagcattgttctggagaggatgagatatgaaggagtggtg
gatttgttccagacggttaaaactctgcgcactcagagacctgccatggtgcagaccgag
gaccagtaccagctgtgttaccgagcagctctggagtatctggggagtttcgaccactat
gcaacgtaa
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integrated database retrieval system
