Ictalurus furcatus (blue catfish): 128624885
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Entry
128624885 CDS
T09387
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128624885 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128624885 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
128624885 (si:ch1073-335m2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
128624885
NCBI-ProteinID:
XP_053508691
LinkDB
All DBs
Position
21:complement(21052085..21071433)
Genome browser
AA seq
3242 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEYFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSSVRGLDDNPPSSSHTRDVASFSRAAVGPVYGPPV
SLHTREGRYERRLDGSSDSRDRAYEHSPYGHHERSGTFDRPRHYNTDYYRDRAIFASGVG
ASPAVSAISGGFETPESHFESRIRDPFTLSGSARRDPYRDDRGRRVDRTYHHRRSRSSHS
SQSRHPSPQRTTGQTPKASHSPKRAPVSPGRGPRSRSRSRSSSSDSVSSTSSTGSGSSDS
NSSSSEGSRARSVQSAATHPPPAPPQLSLDCDEPRRSFGIRVQNLPVRSTDTSLKDGLFH
EFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALSVSKGKLFFGMLIEVTAWNGPETE
SENEFRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGVPQ
YAFVQYSDIASVCKAIKKMDGEYLGANRLKLGFGKSMPTTCVWLDGLSSNITEQYLTRHF
CRYGHVVKVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQVAFYR
SMQASGQDMRDFYEIPSDRRDERRPSYHEFSAERAYYENVRAPGIYADDPRRDYPARSRE
RYPELDHYQGDHYDPRYHEDPREYRDYRDPFEQDIRKYSYIQRERERERERFEADRSRWS
PSHPRRPITPSASPSPSDRVSREAERRVYRHSSERSGSCSSLSPTPQFEKSEKSPVDYKT
ESLDREVEQAEADRASGTEKSKRGKRKEKADREKGEKTKSRRGKVQSPSIPYSEADREPS
LDSNSGKTKGSDAEGSERQRHKAEGEPSPSDPVSRVESQKERLDGAKIDSVDRDNKGRSK
KHLKPELGNEGKDSLGDSERLAARKRRFGDPTGKAIKQKRGRLEDEQSTGVTQPADFVAS
YSKEGEGDVKTLEKEAQKREHPKPKSERVASQFRDELDHRADSQNSSGRQEEHSETNVKS
LDSKAQSGPSVSRRFSNDGTPEKDSKGREEYLDIDLSQSYRKQMEQNRRLRQQLQEPDKP
GKPETPQCVETEDFEHRSLVHEVGKPPQDVTDNSPPSKSKKQDHLDIEVGTKRERVYRIF
RPKSEESEWSTNSPRFNASQHGEEEYTDVPQLITVKEVKEQPKQEDSSHQDMELTVKRVH
TSQVSKISSALHDEQRRWESRLKQDLLPDFSRSSEKRRLNRSYLEYRLWPDLEPGEVRSD
SEEDREHKPNSPMPSTSMSFPERQRRDRLSESKLTGSLERNKFCSFALDQTITPDTKALL
ERAKSLSSSREDNWSFLDSDSHFASFRSRKDTEKVESTPRPTPSWYMKKKKIRSESEDKL
DDRKEDPKPEEQERRELFASRFLHSSIFEQDSRRLQHLERKHEDPEHGMGNAANQQVQIE
GQPDSEPVVLFHDRFLELTRLQQQKGKELTQQESKKEESVDGQVCEKTQEEEQRSAVEPA
EMKPAEIKPVSPVQAPQSSPVQIMQALPVQETQKSPPVVTTKETSPQRDVCNVEASSPKQ
LGLPVKEEEKQSEQPLVCPTNPLPQEPPESNRSETQDSKPLVNEIKTSPTKELELTNDRD
VEQCSGSETQTTDSQVNYHPKSEPQTELPELQNPPSPMIVDEAEGGLGKPEPVTVEPAPP
AKETESKAEDSYTVEEPISPPPRSRNKKGKTSPTTAVAPVTPSSTPDKQSTRKSERIDRE
KLKRSSSPRVESSKAISDAKSAGKSPIHSPETEQSVEQNAPPVRARRRNVRSVYATPVED
ESTPQTGKDVESPRGARKRGVDKDSGQPEPDSLPVLHTARRGRPPKNRRQGEDFSAGKSE
RSKLPETKEFEINETGNNETVTKVGKGKHSPYLHKTANQGTGSGLVKKGDKIDKTADAIT
PAEMDVDSQDGSGQHDGGPSVTNEPKEEQKPQNISETKQEKDRITQTDGTTGSQDKLCES
VQEQSPFDKSVKTKTTRITCSSKLTTEDKSLVLKNLRIRLDVTEVKTILQTGEDESGHDD
CPKKVVPGLSPKEQILEPRFEKEAIDEDGNIKESVTTPPKVKDPHEALLSHQMELEQAVE
NIAKLTEDPAPLQFKNSTEPQAPLSELVEGREEDKPANPASETELAAAIDSITSEEMSCS
VPQDQVTGTVGGPDPDIQTLVPDAKVVEGRNSAAVHEEASNTGTPRKGGKGRPKTQKRTK
GPKAAASKKEAIKEVVVEPENLSIKSSESISAAVPAVTETPPTAAAAAIIAPLSKHDCNI
TANVVPEVPKVIESALKDQPDLPKSSSPAASKSPSSLRSQPNPYECTSPSLSPTSICLKP
SNPSRLSVSPTDRLNQPKEMAVVSPSATPATPLENPALLSDSFVHDVNTSDLRKILAKPR
GIPISEVSATSGSMHTRESDVKSALHENRQSSIPAQPVLRQSETKQVFNEKSVISVIAST
ATSVISRVCNPPESEEKPSLPMANPFVEKQPPKQMYQTSMEEGSVYHGPPVGEEGGNAGR
YIVESTSLSTGPTAGLRVNTSEGVVVLSHSGQKIEGRQRISAKISQIPPPSAVDIESQQL
VTMPQIKQELYSGSQRDMPKGSVPPADHGHPLKSQTNVSTKHESGPDKLDPYAQSGVVKR
LQQAPGPSQVMSFHHSEYTMLMKHPKKGEGSEPLNVENVKTAWVSTISPAISPHLPSTGG
NHVGFIPGTPADRAPSHIQTKQEPRSPRKSGHPHSPFAKVSSPIGSSSPKGVSMVLPTGL
PAMSQYVPSVHHSEQSVIMPPHSTHGSLGRMSPHRVGQAISMGHLSQGDVRVNTPPLSVM
NYGIHSDGLASSWAPGQQRPTSPQAVGNREMVLKVNPASARGHEASDEEAARRFHQALGR
QPATPLKPESIPAEYRGALHSGLPLERFNMQTRDMRMLIYHPQGERPAAELHQGHIAEAV
PPTSTPTSITASLSPRAHLLQKGVSDKDALKQSEIKRATPPPGKDGMLGIRGAIPAMASP
NRVQLITSGTVPPFSEYPAMYTNLRTVHSQFPENSPMGISQPPRNITPSQGAQESDHNQA
QTESQVEHVGHQQINMVQLLTRYPIVWQGLLALKNETAAVQLHFVCGNKSLGLRSLPVPE
TGPPLRIVQRMRLETQQLEGVARRMTGESEFCLLLAMPCGLNQEDVVTQTQVLKSAFINY
LKAKLAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLINQISSISPHLMIVIT
SV
NT seq
9729 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgagaagaa
aaaattgtcgaatattttaaacggtatggtcgtgtggagagcgttaaagtcctccgtaag
cgaggttcagaaggcggcgtggcggcgttcgtggattttgtcgacattaaaagcgcccag
aaggcgcacaacgcagtcaacaaaatgggcgacagagaccttcggaccgactacaacgag
cccggttctgtgcccagctcggtccggggtctggacgacaacccgccgtctagcagtcac
acgagggacgttgcgagtttctcgagagccgctgtggggcccgtttatgggcccccggtg
tctctacacaccagagagggacgctatgagcgcagattagacggcagttcagacagtcgg
gatcgcgcatacgagcacagtccgtacggacaccatgaacgcagtggcactttcgatagg
ccgcggcactacaacacggactattaccgagaccgtgccatttttgcctctggagtcggg
gccagccctgcagttagtgcgattagtggcggttttgaaaccccggagtctcatttcgag
tctcgaattcgtgatcccttcactttgtctggttccgcacggcgggatccttaccgtgat
gacagggggcggcgcgttgatcggacttaccatcatcgccggagtcgatcttctcattcc
tcgcaatcacggcacccttctccacaaaggaccacgggacagacccccaaagcctcccat
tccccaaaaagagctcctgtttccccaggcagaggtccgcgttcgcgttcccgaagccga
tcgtccagctcggattcagtcagcagcaccagtagtaccggaagtggcagcagtgactcc
aacagcagttctagtgaggggtctcgagcacgctcggttcagtctgcagccactcaccca
cccccagctcctcctcagctgtctctggattgcgatgaaccgcgtaggagttttggcatc
agggtccagaacctcccagtacgatccacagacacaagtctgaaagatggacttttccac
gagtttaagaagtatgggaaagtgacttcagtgcagatccacggagcctcggaggagcga
tacggcttggtgttcttcagacagcaagaagaccaggagaaagctctcagcgtgtccaaa
ggaaagctcttctttggtatgctgatcgaagtgaccgcttggaatggccctgagacggaa
agtgagaacgagtttcggccgttggacggacgtattgacgagtttcacccaaaggcaacc
agaaccttgtttattggaaatctggagaaaactactaactaccagcagctgcttgatgtt
tttcagcgctttggagaaatagtggatattgatattaaaagggttaacggtgtccctcag
tatgcctttgtgcaatactctgacattgccagcgtgtgtaaagctattaagaaaatggac
ggagaatacttgggtgccaaccgactcaagcttggttttgggaagagtatgcctacaacc
tgcgtgtggttagacggtctgtcctctaacatcacagagcagtaccttacacggcacttc
tgtcgctacggacatgtggtgaaggtcgtgttcgacagactgaaagggatggccctgatt
ttatacaacaacacagattttgcgcaagctgctgtaagagagaccaaaggttggaagatt
ggaggcaacaaaattaaggttgattttgccagtcaggagagccaagtggcattctatcgc
tctatgcaggcatcagggcaagatatgcgtgacttctatgaaatcccctctgacagaagg
gatgaacgaagaccttcatatcatgaattctcagcagagagggcgtactacgagaacgtt
cgggcgccaggaatctatgccgatgatccacgtcgagactatcccgctcggagccgtgag
cgttatccggaactagaccattaccaaggtgaccactatgacccacgctatcatgaagac
cctcgtgaatacagagattaccgagacccctttgaacaggacatcagaaagtatagctac
attcagcgggaacgcgagcgagaacgcgaacgttttgaggctgatcgcagcagatggagc
ccatcccacccgcgccgccccataaccccttctgcctctccttcaccatctgaccgcgtc
tcgagggaagcagaacgacgtgtgtacaggcactcatctgagaggagtggaagctgtagt
tccttatcacctactcctcagtttgaaaagtctgagaagtctccagtggattataaaacg
gagagtctggacagagaagtggagcaggctgaggctgaccgcgcaagcgggacggaaaag
agcaagcgcggcaagcgcaaggaaaaagcagaccgagagaagggcgagaagacaaagtcg
aggagggggaaagtgcagtctcctagcataccttactccgaagcggacagggagcccagc
ctggattcaaattctggaaaaacaaaaggttcagatgcggagggctcggagaggcagagg
cacaaagctgagggcgaaccctccccttctgatccggtgtctcgtgtggagtcgcaaaaa
gaaaggcttgatggtgctaaaattgattcagtggatcgggataacaaagggagatcaaag
aaacacctcaaaccagaacttggaaacgaagggaaagattcattgggggattctgaaagg
cttgcggcacgaaaaaggcggtttggcgatcctactggcaaagccataaaacagaagaga
ggtcgccttgaggatgagcagagcacaggggttactcaacctgcagattttgtggcgtct
tattcaaaggaaggagaaggcgatgtgaaaactttagaaaaagaggcacagaagagagaa
catcctaagcccaaatcggagagggtggcatctcagttcagggacgaattggatcatcga
gccgattcccaaaactcatctggacgacaagaagagcattccgagacgaacgtgaagtcc
ttagactcaaaggcgcagtctggaccgagcgtgtcaaggcgattctctaatgacgggacc
ccagagaaagacagcaaaggcagggaagagtatttggacatagatctttctcagagttat
cggaagcaaatggagcagaaccggagacttcgtcagcagctccaagaacctgacaaacca
ggaaaaccagaaactcctcagtgtgttgagacggaagatttcgagcaccgtagcttggtg
cacgaggttggcaagccaccacaggatgtcactgataactctccgccgagtaaaagcaaa
aaacaagaccacttggacatagaggtcggtaccaaaagagaacgggtataccgaattttc
cggccaaagagtgaagagtccgagtggagcacgaactctcccagatttaacgcctctcag
catggagaggaagaatatacagatgttccccaactaattactgtgaaagaagtaaaagaa
caacctaagcaggaagacagttctcaccaggacatggagctaacagttaaacgtgtccat
acctcacaggtgtccaagataagctcggccctacatgatgagcagaggcgttgggaaagt
cgcctaaagcaggacttgttgcctgatttttcgaggagctcagaaaaaagacgcctcaat
cgatcatatttggaatatagactttggcctgatttagaacctggtgaggtgcgctctgac
tctgaggaagatcgagaacacaaaccaaactctcccatgccctcaacgtcaatgtccttt
cctgaacggcaacgccgagacagattatcggaatccaaactaaccggctcgctggaaagg
aacaagttttgttcatttgcacttgaccagacaattacaccagacactaaagcattgctg
gagcgtgcaaagtcgttatcctcttcaagggaagacaactggtcttttctggacagcgat
tctcattttgccagtttcagaagcagaaaagatacagaaaaggtagaatcaacaccccga
ccaactccttcgtggtacatgaagaagaagaaaatacggagcgagtctgaggataagctg
gacgaccgaaaggaagatcctaaaccagaagaacaagagcgccgagagctctttgcctct
cggtttctccacagttctatcttcgagcaagactcgaggcgcctccagcatcttgaaaga
aagcatgaagaccctgaacatggtatgggcaatgcagctaaccagcaagtccagattgaa
ggtcagcctgattctgaaccagtggtcctcttccacgatcgctttctagagttaacgaga
ctgcagcaacagaaggggaaagagcttactcaacaagaatccaagaaagaggaaagcgtt
gatggacaagtctgtgaaaagacacaggaggaagagcaacgcagtgctgttgaaccggcc
gagatgaagccagctgagattaaaccagtcagccctgtacaagcccctcagtcaagccct
gtgcaaatcatgcaagcccttcctgttcaagaaactcagaaatcgccgcctgttgtaaca
actaaggagacgtcaccacagcgggacgtttgtaacgtagaagcatcttcacctaaacag
ctcggtcttccggtgaaagaagaagaaaaacagtcagaacagccattagtctgcccgaca
aatccactgcctcaagaaccccctgagtcaaatagatctgaaacccaggactcaaagcct
ttggtgaatgaaattaaaacaagtcctactaaagagttggaattgaccaatgaccgggat
gtagagcagtgctccggtagcgagacgcagaccactgactctcaagtgaactatcaccca
aaatctgagccacaaactgagctccctgaattacaaaatcctccctctcctatgattgta
gacgaagctgaaggaggattagggaaaccagagcctgtaaccgtagaacctgcacctcct
gccaaagaaactgagtcaaaagctgaggacagttatacagtggaggaaccaatttctcct
cctccaaggtccagaaacaagaagggcaagacctcacccacaacagcagtagcccctgtg
accccatcaagcacaccggataaacaaagtactcgcaaaagtgaacgtattgatagagaa
aagcttaaacgctcctcttctccaagagtggagtcatctaaagcaatttcggatgccaag
tctgctggcaagtcacccatccatagccctgagactgaacaaagtgtagaacaaaacgct
ccccctgtgagagcaaggcgtagaaatgtacgttctgtttatgccaccccagtagaagat
gaatctacaccgcaaactggcaaggatgtggagtcaccgcgtggagcacgtaagcgtggt
gtagacaaagactcagggcaaccagaaccagacagcctccctgtactgcacaccgcacgc
cggggacggccacctaagaatcggcgccaaggagaggatttttcagctgggaagagtgag
cggtcgaaattacctgagactaaggagtttgagatcaatgaaactggaaacaatgaaact
gtcaccaaagtaggcaaaggcaaacattccccctacttgcacaaaaccgcaaatcaaggt
accgggtctggattagtgaaaaaaggagacaaaatcgataaaacagccgacgctataact
cctgctgagatggatgtggattctcaagatggcagtggccagcatgatggcggtccttca
gtgacaaatgagccaaaggaggagcaaaaaccacaaaacatttcagagacaaaacaagag
aaagacagaatcactcaaacagacggcactactggaagccaagataaactctgtgagtct
gttcaggagcagtcaccttttgacaaaagtgtgaaaacaaaaactactcgaataacttgt
agttcaaaactaacgactgaggataaatctcttgttctcaaaaacctccgaatcaggctt
gatgtgaccgaggtaaagacaattctgcaaactggtgaggatgaatcggggcatgacgac
tgccctaaaaaggttgtcccaggtttgtcgcccaaagagcaaatcctagaacctagattt
gagaaggaggccatagatgaagatggtaatattaaagagtctgtaacgacacccccaaag
gtcaaggatccgcatgaggcgttgttatcccaccagatggagctcgaacaagctgtggag
aacattgccaagcttacagaagaccctgctcctcttcagttcaagaactcaaccgagcct
caagcccctttgtctgaacttgtagaggggcgtgaggaagacaagcctgctaatcctgct
agcgaaacagaacttgccgccgctattgattccatcacatctgaagagatgtcttgcagt
gtgccacaagaccaagtcactggcactgttggcggtccagacccggatattcaaactcta
gtcccggatgccaaagttgttgaaggccgcaactcggccgctgtccatgaagaagcttca
aacactgggacgccaagaaaaggaggtaaaggaagaccaaaaacccagaagagaaccaaa
gggccaaaggctgctgcaagcaaaaaggaagccatcaaagaggttgtagtggaacctgag
aatctttctatcaagtcctcagaatccatatccgcagcggtaccagcggtcacagagacg
ccgcccacagctgctgctgctgctataattgctcctttatcgaagcatgattgcaatata
actgctaacgttgtccctgaagttcctaaagtgattgagagtgctcttaaagatcagcct
gacttgccaaaatcgtctagtccagcagcaagcaaaagcccatcatcactcaggtctcag
cctaatccttatgagtgtacatctccctctctttctcctacaagtatttgcctgaaacct
tcaaatccaagcagactttccgtttccccaacagaccgattgaatcagcctaaagagatg
gcagtagtctccccttcagccactcctgcaactccattagagaacccagcgttgctgtct
gattcctttgtccacgatgttaacaccagtgatctgcgtaaaattcttgcaaaaccaaga
ggtattccaatctcagaggtcagtgctacttctgggagcatgcatacgagggagagtgat
gtcaagagtgcgctgcatgaaaacaggcaatcttctattccagctcagccagtacttcgt
caatcagagacgaagcaagtctttaacgagaaatctgtgatttccgtcattgcctccact
gccacctcggtcatcagtcgagtttgcaacccccctgaatccgaggagaaacccagtctt
ccaatggctaacccatttgtggaaaagcagccaccaaaacagatgtaccagaccagcatg
gaggaaggtagtgtttatcacggtccacccgtcggagaggaaggtgggaatgcaggtcgc
tatatagtggagagcacatccctgagcacaggccccactgctgggctcagggtaaacacc
tctgagggggtagtagtgctgagtcactcgggacagaagattgagggacgacaacggatt
agtgccaagatcagtcaaattccaccacctagtgcagtggacatagaatctcagcagctg
gtgacgatgcctcagatcaaacaggaactttacagtggatctcaaagagatatgcctaag
ggttcggtaccaccagcggaccatggtcatcccctgaagtcgcagaccaatgtttctact
aagcatgaatccggaccagacaaattagacccgtacgctcaaagcggggtagtaaaaaga
ttacagcaggcacccggcccgtcacaagtgatgagtttccatcactcggaatacacaatg
ctgatgaagcatccaaagaaaggagaaggaagtgaacctcttaatgtggaaaatgtgaaa
actgcttgggtgtccactataagtcctgccataagccctcaccttccctctacaggtggc
aatcatgtaggattcataccaggtacgcctgcggatagagccccttcacatattcagacc
aaacaggaaccccgctcgccgcgaaaatccggtcacccccattctccctttgccaaagtg
tcttctcctattggctcttcatctcctaaaggcgtgtctatggtcttaccaaccggttta
cccgccatgtctcagtatgtccccagcgtgcatcactctgaacagtcagtcatcatgcct
cctcatagtacacatggcagccttggcagaatgtcacctcaccgtgtgggccaggccatt
tccatgggtcacctttctcagggagatgtaagagtcaacacgcctccgctgtcggttatg
aactacggaattcactctgacggcctcgcttcgtcttgggcgcctggtcagcagcgcccc
acgtctcctcaggctgtgggtaacagagaaatggttctcaaagtcaacccggccagtgca
agaggtcacgaagcaagcgacgaggaggcagcaagacgctttcatcaagcgcttggaagg
caaccggcgactccactcaaaccagagtcgataccggcggaataccgtggcgctcttcac
agcggactgccactggagcggtttaacatgcaaacaagagacatgcggatgctgatatac
cacccgcagggagagcgtccagctgccgagctgcaccaggggcatattgcggaggccgtc
cctcccacctcgacaccgaccagcattacggcctcgctctctccacgggcgcaccttttg
cagaaaggagtgtccgacaaggatgccctgaagcagtctgaaataaagagggccacaccg
ccccctgggaaagatggaatgctgggaatccgtggcgcaatacctgccatggcctctcct
aatagagtacaactgatcacatcagggaccgtgccacccttttcggagtatccggccatg
tacaccaacctgcgcaccgtgcattcacagtttcccgaaaattcacctatggggatcagc
caaccacctcgcaacatcactccatctcagggtgctcaagaatctgaccacaaccaggct
cagactgaaagtcaagtggagcatgttggacaccaacagatcaacatggtacagcttctc
acgaggtatcctattgtgtggcaaggcttgctggcattgaaaaatgaaactgctgctgtc
cagttgcattttgtgtgtggaaacaaatctcttggcctgcgctcgcttcccgtgccggag
actggacctcctctgcgtatcgtccagaggatgagattagaaacgcaacagcttgaagga
gtagctcgcagaatgaccggtgagagtgaattctgcctcctgctcgccatgccttgcggt
ctaaatcaggaagacgttgtgacgcagacacaagtgctcaaatcagccttcattaactac
ctgaaggccaaactggctgcaggcatcatcaatgtccccaatcctggctccaatcagcct
gcctacgtgttgcagatcttccctccgtgcgagttttcagaatctcacctttcacggctt
gcccccgacctcatcaaccagatctccagcatttcgcctcacctcatgatcgtcatcacc
tcggtgtga
DBGET
integrated database retrieval system
