Ictalurus furcatus (blue catfish): 128625361
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Entry
128625361 CDS
T09387
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu02010
ABC transporters
ifu04146
Peroxisome
ifu04977
Vitamin digestion and absorption
ifu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128625361 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128625361 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
128625361 (abcd4)
04980 Cobalamin transport and metabolism
128625361 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128625361 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128625361 (abcd4)
Enzymes [BR:
ifu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
128625361 (abcd4)
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
128625361 (abcd4)
Transporters [BR:
ifu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
128625361 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
FtsK_SpoIIIE
DEAD
AAA_7
AAA_22
DUF87
NACHT
AAA_29
DUF4149
Motif
Other DBs
NCBI-GeneID:
128625361
NCBI-ProteinID:
XP_053509600
LinkDB
All DBs
Position
1:complement(2426032..2438615)
Genome browser
AA seq
622 aa
AA seq
DB search
MEIFSVSMLDRIQQQKVFVFFVCLFFPHRLRLDWRFIKRFCRILRVLFPRWCSRNVVMYG
TLLGVTLLVQLVIYQVGLIPSQFFGVLSEKNYGKFKELVAFSVLLVLLNSALKSLEQYIS
NLLYISWRKCLTRSLHRDYFSGRVFYTLNVLRKDVDNPDQRMTQDAERLCNQLSSMASRL
VISPFTISYYSYQCFNITGWIGFVSILGYFLVGTVANKFLIGPVVSTLVEQEKLEGNFRF
KHMQIRVSAESAAFYRAGNVEHVRTDHRLQSLLHTQRNLINRELLLYLGVNTFDYMGSIL
SYIIIAIPIFAGVYDGLSPEDITVLISKNAFVCMYLINCFTQLIDLSTTVSDVAGYTHRI
GELQEVMKDISRKQDDQEDCMPVGMGNFVRDGETSPSSSGAAVVLDKLSFTSPFSEDLLV
KDLSLGVYEGTHLLVVGNTGTGKTSLLRVLNLLWEPSNGSVQMNTCFGPRGIMFLPQKPF
LTDGTLREQVIFPLKDIIPDTGSVDDERILRYLELAGMSSLLKRTGGLDGKVDWNWYDVL
SPGEIQRLCFARLFYLQPKYAVLDEATSALTEEAEEQMYRACKQLGMTLISLGHRSSLKQ
YHDVMLRLCGGGQWELTELETR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaatctttagcgtatccatgttggatcgtatacaacagcagaaagtgtttgttttt
tttgtttgtttgtttttcccgcacagactgaggttggactggaggttcatcaagagattc
tgcagaatattaagagtgcttttcccgagatggtgcagtcggaatgttgtcatgtacggc
acgctgctcggagtcactcttttagttcagctggtgatttaccaggtgggtctgatcccc
agtcagttcttcggcgtgttgtcggagaagaactacggcaagtttaaggagctggtggcg
ttttccgtcctgctcgtcctgctcaactctgcgctgaagagtctggagcagtacatcagc
aatctcctgtacatcagctggaggaaatgtctaacgcggagcctccatcgagattacttc
agcggacgggtcttctacaccctcaacgtcctccggaaggatgtcgataacccagaccag
aggatgactcaggatgcagagaggttgtgtaatcagttgagcagcatggccagtcgactg
gtcatttccccgttcaccatctcctactactcataccagtgctttaacatcactggatgg
attggattcgtcagtatcctcggatacttcctggtcggcaccgtcgccaacaagttcctg
atcggacccgtcgtgtccacattggttgaacaggaaaagctggaaggaaacttcaggttc
aagcacatgcagatcagagtcagtgccgaatccgcggctttctacagagcagggaacgtg
gaacacgtgcggacggaccacagactccagagtctcttgcacacacagaggaacctgatc
aacagggagctcctgctctatcttggagtaaacacgtttgactatatgggaagcatcctc
agctacatcatcattgccatacccatctttgcgggcgtgtacgatggtttgagcccggag
gacatcaccgttctcatcagcaagaatgcctttgtgtgcatgtacctgattaattgtttc
acgcagcttatagatctttccacgacagtctccgatgttgcaggttacacccacagaatt
ggagaactacaggaagtgatgaaggacatcagcaggaagcaggatgatcaagaagactgt
atgcctgtggggatgggtaacttcgtcagggatggagagacctcgccctcttccagcggc
gctgctgtcgtactggacaagctgtcctttacgtctccgttctccgaggatctgctggtg
aaggacttgagtctcggggtttatgagggaacacacctgctggtggtgggaaacacgggc
acggggaaaacatctctcctcagggtcctcaaccttctgtgggaaccttctaatggttct
gttcagatgaacacgtgttttgggccgaggggaatcatgttcctgccccagaaacccttc
ctgaccgacggcacccttcgagaacaggtgatcttccccttaaaagacatcattccagac
acaggttccgttgacgacgagagaattttgcgatacctggaactggctgggatgtccagt
cttttgaagaggacgggaggtctggacgggaaagtggactggaactggtatgatgtttta
tcaccaggtgagattcagaggctgtgctttgccaggcttttctacctgcagccaaaatac
gcagtgctggatgaagccaccagcgctctgacagaagaagctgaggaacagatgtacagg
gcttgtaaacagctgggcatgactctgataagcctgggtcaccgcagcagcctgaagcag
tatcatgatgtcatgctgaggctgtgtggaggcgggcagtgggaactcactgaattggaa
acgaggtga
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