KEGG   Indicator indicator (greater honeyguide): 128967836
Entry
128967836         CDS       T11604                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
iin  Indicator indicator (greater honeyguide)
Pathway
iin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:iin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128967836 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:iin03041]
    128967836 (SMNDC1)
Spliceosome [BR:iin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    128967836 (SMNDC1)
 Complex B
    128967836 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    128967836 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 128967836
NCBI-ProteinID: XP_054238056
LinkDB
Position
7:8184717..8194927
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLTS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagctagctagctacaaagctcagcttcagcaagttgag
gctgccttatctgggaatgcagaaaatgaagacttactaaaactgaagaaagacttacag
gaagtcatagagttaaccaaagatctcctttcaacacaaccttcggaaactcttacaagt
tctgacagttctgcttctgctctgcccagtcactcctggaaggttggggataggtgtatg
gcgatatggagtgaagatggacagtgttatgaagctgagattgaagaaatagatgaggag
aacggaacagctgcggtcacatttgctggctatggcaacgctgaggtgacacctctgttc
aacctgaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaagaacgagaggaccagaaagtcaagtggcaacaa
tttaacaacagagcctactctaaaaacaaaaaaggccaggtaaagaggagtatttttgcc
tcccctgagagtgtaactggcaaagttggagttggaacgtgcggaattgcagacaaacct
atgacacagtatcaagatacctccaaatacaacgttaggcatttgatgcctcagtaa

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