KEGG   Ipomoea nil (Japanese morning glory): 109158438
Entry
109158438         CDS       T04663                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03420  Nucleotide excision repair
ini04120  Ubiquitin mediated proteolysis
ini04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109158438
   04120 Ubiquitin mediated proteolysis
    109158438
  09124 Replication and repair
   03420 Nucleotide excision repair
    109158438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109158438
   03400 DNA repair and recombination proteins [BR:ini03400]
    109158438
Enzymes [BR:ini01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109158438
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109158438
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     109158438
   Cul2 complex
     109158438
   Cul3 complex
     109158438
   Cul4 complex
     109158438
   Cul7 complex
     109158438
   Cul8 complex
     109158438
   Cul9 complex
     109158438
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109158438
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109158438
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 109158438
NCBI-ProteinID: XP_019161895
LinkDB
Position
Un
AA seq 118 aa
MASLDTDVAMVPAGEGSSGATPSSSTKKGKKFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcatctctggacactgacgtggcaatggttccggccggcgagggttccagcggcgct
actccgtcgtcttcaacgaagaaaggaaagaaattcgagatcaaaaagtggaatgccgtt
tccctctgggcttgggatattgtggttgataattgtgctatttgtaggaaccatatcatg
gatctctgtatcgagtgccaagctaatcaagctagcgccacaagtgaggaatgcactgtt
gcttggggagtttgtaaccatgccttccacttccattgcattagccgatggctcaagact
cgtcaagtctgccccttggacaacagcgagtgggagttccagaagtacgggcactag

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