Ipomoea nil (Japanese morning glory): 109158438
Help
Entry
109158438 CDS
T04663
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03420
Nucleotide excision repair
ini04120
Ubiquitin mediated proteolysis
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109158438
04120 Ubiquitin mediated proteolysis
109158438
09124 Replication and repair
03420 Nucleotide excision repair
109158438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109158438
03400 DNA repair and recombination proteins [BR:
ini03400
]
109158438
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
109158438
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109158438
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
109158438
Cul2 complex
109158438
Cul3 complex
109158438
Cul4 complex
109158438
Cul7 complex
109158438
Cul8 complex
109158438
Cul9 complex
109158438
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109158438
TCR (transcription coupled repair) factors
Cul4-CSA complex
109158438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109158438
NCBI-ProteinID:
XP_019161895
LinkDB
All DBs
Position
Un
AA seq
118 aa
AA seq
DB search
MASLDTDVAMVPAGEGSSGATPSSSTKKGKKFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctggacactgacgtggcaatggttccggccggcgagggttccagcggcgct
actccgtcgtcttcaacgaagaaaggaaagaaattcgagatcaaaaagtggaatgccgtt
tccctctgggcttgggatattgtggttgataattgtgctatttgtaggaaccatatcatg
gatctctgtatcgagtgccaagctaatcaagctagcgccacaagtgaggaatgcactgtt
gcttggggagtttgtaaccatgccttccacttccattgcattagccgatggctcaagact
cgtcaagtctgccccttggacaacagcgagtgggagttccagaagtacgggcactag
DBGET
integrated database retrieval system