Ipomoea nil (Japanese morning glory): 109165868
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Entry
109165868 CDS
T04663
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04075
Plant hormone signal transduction
ini04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109165868
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109165868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ini03000
]
109165868
Transcription factors [BR:
ini03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109165868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109165868
NCBI-ProteinID:
XP_019170372
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All DBs
Position
Un
AA seq
698 aa
AA seq
DB search
MPLSEFLKMLKNESGERKPTSSSADDLSPLPGSDFSELVWENGQITMQGQSSKAKKSDNL
SRMREKCVGNASSSRIGKLDLAGSVLDEMPPSVPSGEMDLSQDDEIAPWLNYSPSNGQSQ
EYGSQLLPEISGTTANEPSPHDGFPLIGASKSVVNSGQRNATKLDCSPRFGLLASWSSQQ
ANPLVSGVSDIGSSNGSINLDSILKDSVPPQAKNQDTETTRTCPPTLLNFSNFSRPVVLA
RANLQNTLEAKGKREKEIKENAQNPAKTALIEACSTSRKESDLKSQPNLRTKFEQTDASR
EDTNDADKVHGNKAVEPGACSSVCSGSSAERASNDQSHSLKRRARENEESGCPSEDADEE
SAGAKKAAPARGGTGQKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLD
EAIEYLKTLQLQVQVSRITVHYPNLMQIMSMGAGLCMPQMMFPAGMHHHMHAQMPHFPQM
GLGIGMGMGFGMGLPELNGARSPGCPIFPMPAMPRPHFHSPSISGPINFPGMATATSNIQ
AFGHPCQGVPMSVPRTPFVPLSQQPSASSAPGLNASKMRMDGESEDPVKIKNLQMTQNSD
PIPSRLKNQTSQVQTTSDQQPNASDNPTVNPTNSTNVPGSKQQVCNVTRDAERKEQKRAE
APRIVNSIQYIRRHLIEDGLCCAQRNEIAFIRKGDIAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccactctctgagttcttgaaaatgctcaagaatgaatctggggagcggaaacccacg
tcgtcttctgctgatgatctatctcctttaccagggagtgatttctctgaacttgtgtgg
gaaaatggtcagattactatgcaaggccagtcgagtaaagctaagaagagtgacaatctt
tctaggatgcgggagaagtgtgtagggaatgcctctagctctaggattgggaagctagat
ttagcgggttctgttttggatgaaatgcctccctcggtgccctctggcgaaatggatttg
agccaggacgacgagattgctccctggctaaactattcgccttctaatggtcagtcacaa
gagtatggctctcaactcttgccagaaatatctggaacgactgcaaatgaaccgtctccc
catgatggtttcccgttgattggggcttccaagagtgttgtgaactcgggacagagaaat
gcaacgaaactcgattgttctccgaggtttggactgttagcctcgtggtcttctcagcaa
gctaaccccctcgtatcgggagtttcagatatcgggagcagtaatggtagtatcaatctc
gattctatattgaaagattcagttccaccccaagctaaaaatcaagacaccgaaactact
cgaacttgcccccctactttgttaaacttttctaatttctccagacccgttgtgcttgcc
agagctaatcttcaaaacactttagaagcaaagggaaaaagggagaaagagatcaaagaa
aatgcccagaatcctgctaaaaccgcgcttattgaagcatgtagcacctcgagaaaggaa
agtgaccttaaaagtcaacctaatttacgcactaaatttgaacagaccgatgcttcaaga
gaagatactaatgatgctgacaaggtccatggtaacaaagctgtcgagcccggggcttgt
tcttctgtatgctcgggcagtagtgcggagagagcttcaaatgatcagtcccacagttta
aagagacgagctcgagaaaacgaggagtctggatgcccaagtgaagatgcagacgaagaa
tcagctggtgcgaaaaaagcagctcctgctagaggaggaacagggcaaaagagaagccga
gctgcagaagtgcacaatctatcagaaaggcgacgaagagacaggatcaatgaaaagatg
cgggcattgcaggaacttatacccaactgtaataaggcggataaagcttcaatgcttgat
gaagctatcgaatatttgaagacacttcaacttcaagtgcaggtaagtcgaattacagtg
cattatcccaacttgatgcagattatgtcaatgggagcgggattgtgtatgccacaaatg
atgttccccgcaggaatgcatcatcacatgcatgctcaaatgccacattttcctcagatg
gggttagggatagggatggggatgggttttgggatgggcttgcccgagcttaatggtgcc
agatccccgggatgtcccatctttccaatgcccgctatgccaagaccacatttccattcc
ccgtcaatttctggacccattaacttcccaggaatggctactgcaacgtctaatattcag
gctttcggacatccttgtcaaggagttcctatgtcggtcccaagaacaccattcgtccct
ttgtctcagcagccttctgcaagttcagccccgggtttgaatgcctcaaagatgagaatg
gatggagaaagcgaggatccagtaaagatcaagaacttgcagatgacacagaattctgat
cctatacctagtcggttaaagaatcagaccagtcaggttcaaacaacaagcgatcaacaa
cccaatgctagcgataacccaactgttaacccgacaaactcaaccaacgtgcctggcagc
aagcagcaggtatgtaacgttacaagagatgctgaacggaaggagcagaagcgagctgag
gcaccacgcattgtgaatagtatacaatatattcgtcggcatctaattgaagatggcctt
tgctgtgctcagagaaacgaaatagctttcatcagaaaaggcgatatcgcagagtga
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