Ipomoea nil (Japanese morning glory): 109180558
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Entry
109180558 CDS
T04663
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109180558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109180558
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109180558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Big_2
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_16th
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
109180558
NCBI-ProteinID:
XP_019185741
LinkDB
All DBs
Position
Un
AA seq
1944 aa
AA seq
DB search
MLLCRFPFIIPVFLMTLLPQTAPFSLSGPHIADVNILLPPKMTHPVEYRLQGSDGCFKWS
WDHHDILALLPEYNASSLCSTSARLKSIAPYSGRKETAVYATDMNTGAVIRCKIYIDKIS
RIKIFHSSVKLDLDGLATLRVRAFDSEENVFSSLAGLQFMWQLMPEKDGLPHHLLHVPLK
ESPLSDCGGLCGDLDIQVKIEDSGVYSDLYVVRGTEIGHEVVSVHLVEPLSEHMADNIVL
TVAEAMSLDPPSPVCVLLDAIVHYSLKVIHGNIPQLVTLPSAFHRWSILNSSVAQVDQMM
GTVRALNLGMTTVIVEDTRVAGHTQVSTFLVVLPDSLLLYILPLSAAGDPVEGIEPIPSV
SRWYIVAGRQYLIHTKVFSQGPGAQEIYITKNDNIELHDTQSEFWSILPIADEIVEKGRS
RILKATSYGLGKLIATLKYSSGDDGTKKILKVVQEVMVCDQVKFSMDGVLGRILLPWAPG
VHQEMELKATGGCAMLSSDYKWFSSDMAIVSVSASGIVEAKNPGRATIKAVSSFDSLNFD
EVVVEVYLPSSMLMLPNFPVETLIGSHLLASVTLKTSNGAFFHKCDAFRSSIKWKCESDA
FTIVDAGWSLISDKLGILDFDMSSHGPPCAWSFVYAASSGQTMLHATMTKEYQPFDHSIS
SSVVLKASSRIAAYSPLHVYQASDGNQFGGYWVDMVQTVASNQQNLEYLYLVPGTHVDLM
LNGGPERWDHGVEFIETVEATGQGNSDFKDGLVHKIFNMHGSAHRIKCQEVGNYKLTFKR
GNLIGNDHPLPAISEVQLLLTCSFPSSIALIADEPVNAIEVIQSVALAERTNERIQTTPV
RVANGRTVRMSAVGISDSGKAFANSSSLPLMWELIDCDDLAFWDDLATTQSNWEKFLVLQ
NATGLCLVRATVVPSSSHVSQHFIEVQNDLTDAIPLQLVSSLRLLPEFSLLFFSPDARLN
LSITGGSCSLDTLVNDTKIVEIMQPAPGLQCLQLLLAPKKLGAVLVTVRDIGLAPPLSAS
SMVQVADVDWIKITSGEELILMQGSMQEINFLAGVSSGFTFDLSQYAYMSIHVHIEDDIV
ELVANDQFSSNVDGYVNMQNFTVHAVHVGVTNLYISARRHSGHEIRSQPIKIEVYAPPRI
HPSDIFLVPGASYALTVKGGPISGAYVKYSCKDVEVAKIHSSSGRVSAVSPGNSTVIATV
YTSGDLVICQAYGKVKVGVPSLAMLSVQSEQFAVGRHMPIFPSLSEGNLFSFYELCKNYK
WTIEDEGVLGFEAVDYLHSKNRMIPFSTGKEYGSTGYSVDHDNGFIKVLHGRSAGKTNVK
ISFTCDFLSSKSSLRSRLYNASISMVVVPELPLALGLPATWTLPPHYTTSDLLPLSLDSH
SKGNSPSLKNSIMYSLLGECDRKVDGVPDDAIFIDEGKIRTTGSGNLACIQAKDMSTGRT
EVGSCLRVAEVAQIRFTGENLLVHTLAIGGEVHLPIKYYDVLGNPFHEAQGIVQYGVETN
YPDVVSIEDSGDSNGKIHLRALGQGRALLQIAFSSNPQKSDYVVIFVGARLHPQNPVLHP
GSHLNFRVEGLDDQILGQWFSANESIVSVDLLSGKAEAIREGTTHVIFNSSNVQLQTVVS
VLKQGILSVHAPNETLTNVHIPAKGYSFIVKLDGSHSQDIKTAQDTIDILFDCKVDPPIG
YVKPWKDFDTGNSYCLFFPYSPEHLVFSSPESRSMGQKMSVSISASLKGEKHVSSSASAL
FVGGFSILEVDRDSLRLNLTSGSIRSIITIVGNTNVEMLWHDKDRLSVRPIHRDNSQIGW
HARYEVKIDKAEKFRDKLVIKLPATGQIMEVDVNYDPEEREALGISATYPNLLLLAVVCI
AVCTLCAAIILYYMEHADRIRQSNTPGTPGVAAPITPQRSSPAVVNEESPRTPQPFLDYV
RRTIDETPYYRQDFRRRANPQNTF
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgcttctatgtcgtttcccgtttatcattccggtgtttctcatgacacttttgcctcaa
acggcgccgttttcgttgtccggtccacacattgcggatgtgaacatactgttgcccccc
aagatgactcatcccgtggagtacaggctgcaggggagtgatggttgcttcaaatggtct
tgggatcatcatgatattctagcgttattgcctgaatacaatgccagcagtctctgctcc
acaagtgcccgcttgaaatcaattgccccatatagtggtagaaaggagacggctgtgtat
gcaactgacatgaacacgggggctgttattcgttgcaaaatttacattgataagatatcc
aggatcaagatattccatagttcagtcaaacttgaccttgatgggcttgctactctcaga
gtgcgtgcctttgatagtgaagaaaatgtattctcatctttagcgggcttgcagttcatg
tggcagctgatgcccgaaaaggatggattgcctcatcacctccttcatgttcctttgaag
gagtccccattgagtgactgtggtggattgtgtggtgacctggatatccaagtaaagatt
gaagatagtggtgtatattctgatctatatgtagtacggggaactgagattgggcatgag
gttgtttctgttcacttagttgaaccattgtctgaacatatggccgataatattgtgcta
actgtagcagaagcaatgtctcttgatcctccttcccccgtttgtgttcttcttgatgcc
attgtccactatagtcttaaagttatccatggaaatattcctcagcttgtaactttgcca
tctgcatttcatcggtggtctattttgaactcctcagttgctcaggtggaccagatgatg
ggcacagttcgtgctttaaacttgggaatgacaacagttattgttgaagacaccagggtt
gctggtcacacacaggtgtctactttccttgttgtccttccagattctttattgttgtac
atattacccctttctgctgctggtgatcctgtggaaggaatagaacctattccatcagta
tcacgctggtacattgttgctggcaggcaatatctcattcacacaaaggtcttctcacag
ggacctggtgctcaagaaatttatattaccaagaatgataacatcgaattgcatgatacc
cagtctgaattctggagtattctaccaattgcagatgaaattgttgagaaaggcagatct
agaatcttaaaagcaacctcatatggactgggaaaattaattgcaactttgaaatatagt
agtggtgatgatgggacaaagaaaattctcaaggttgtgcaagaagtgatggtctgtgat
caagtgaagttcagcatggatggtgtcttaggtagaattcttcttccttgggcccctggt
gttcatcaagagatggaactcaaggcaactggtggctgtgcaatgttatcaagtgactat
aagtggttctcttcggacatggccattgtttctgtatctgcttcagggattgtcgaggca
aaaaatcctggaagagctaccattaaagctgtttcctcttttgattctcttaattttgac
gaggtggttgttgaagtttatttgccttcttctatgctaatgctgcctaatttccctgtg
gagactttgataggatcacatcttctggcttctgtgacattgaaaacatcaaatggtgcc
ttcttccacaaatgtgatgcttttagatcctccattaagtggaaatgtgaaagtgatgct
ttcacaattgtggatgctggttggtcattgatttctgacaagctgggaattcttgacttt
gatatgtcatcacatggccctccatgtgcttggtcctttgtatatgctgctagttctggt
cagacaatgctgcatgcaacaatgactaaagaatatcaaccgtttgatcactccatcagt
agctctgttgttctgaaagcatcatcacgtattgctgcttattcacctcttcatgtgtat
caggcaagtgatggaaaccaatttggcggttactgggttgatatggttcagactgtagcc
agcaatcaacagaatttggagtacctatatcttgttccaggcactcatgtagatttgatg
cttaatggggggcctgaaagatgggaccacggagttgaatttattgaaacagttgaagcc
actggtcaaggtaactctgactttaaagatggtcttgtacataaaatatttaacatgcat
ggtagtgcgcacagaataaagtgccaagaagtggggaactacaagcttactttcaagcgt
ggaaatttaattggaaatgatcatcctctacctgctatatctgaagtgcagttattgctg
acatgtagcttcccatcctcaattgcattaatagctgatgaacctgtaaatgctattgaa
gtcattcaatctgtagctctggctgagcgcaccaatgaaaggatccaaactaccccagtc
agagtagcaaatggccgcacggttcgaatgtcagcagtagggattagtgactctggaaaa
gcttttgcaaactcttcttctcttcctttgatgtgggaacttatagattgtgatgatttg
gcattttgggatgatttagcaacaacccaatcaaactgggagaagtttttggttttgcaa
aatgcaacaggactctgtcttgtacgtgccacagttgtgccatcaagtagtcatgtgagc
cagcattttatagaagttcaaaatgatcttactgatgccattcccttgcaacttgtttcg
tctttaagacttctccctgagttcagcttattgtttttcagtcctgatgctaggttgaat
ctctcaattaccgggggaagctgttctcttgatactctggtaaatgatactaaaattgtg
gagataatgcaaccagcacctggtttgcagtgtttacaactacttctagctcctaagaaa
ttgggtgctgtgcttgtgacagtgcgagatattgggcttgctccaccactttctgcttct
tcaatggtccaagttgcagatgtggattggattaaaattacatctggagaggaactaatc
ctcatgcaaggaagtatgcaggagattaattttctcgctggggtaagcagtggatttact
ttcgatttgtctcagtatgcttatatgagcatacacgtccacattgaagatgatatagtt
gagcttgttgctaatgatcaattttcaagcaatgtggatgggtatgtaaatatgcaaaat
ttcactgttcatgctgtacatgttggagttacaaacctctatatcagtgctaggcggcat
tctggacatgaaatacgtagccaaccaattaagattgaagtttatgcgccaccaagaata
catcccagtgatatttttcttgtgccaggtgcatcttatgctcttactgtaaaaggaggc
ccaataagtggtgcatatgtcaagtattcttgtaaggatgttgaagttgccaagatccac
tcatcttcagggcgagtttctgcagtttcaccaggaaattccactgtgattgccacagtt
tatacgagtggagatcttgttatctgtcaggcctatggaaaagttaaagttggtgtccct
tctttagcaatgttgagtgttcagagtgagcagtttgctgttggtcgacatatgccaata
tttccttctctttctgaaggaaatttattttcattttacgaactgtgcaagaactacaag
tggactatagaagatgaaggggtattgggttttgaagcagtagattacttgcatagcaaa
aatcgtatgatacctttttccacaggaaaggaatatggatccactggatactcagtagac
catgataatggttttatcaaagtgttacatggaagatctgctggcaagactaatgttaag
atttctttcacctgtgattttttgtcttctaaatcttcattgcggtcgaggttgtataat
gcatccatatccatggtggtagtgcctgagcttccacttgctcttggattaccagctacc
tggactcttcctcctcattataccacatcagaccttttgcctttatctttggattcacac
agcaaggggaattctccaagtcttaaaaattcaatcatgtattcgttacttggggagtgt
gacagaaaggtggatggggtgccagacgatgctatatttattgatgaaggtaaaataaga
acaacaggaagtggtaatcttgcatgtattcaggcaaaagatatgtcaactggaaggact
gaggttggttcttgtttgagggttgctgaagtggctcaaataagatttactggagagaat
ttattggttcacacattagccattggtggtgaagttcatcttccaattaaatactatgat
gttcttggaaatccttttcatgaagcacagggtattgttcagtatggagttgaaaccaac
taccctgatgtagtctccattgaagattcaggtgacagcaatggaaaaatccatctcagg
gcacttggtcaaggaagggctcttctgcaaatagcattttctagtaatccacagaagtca
gattatgtggtaatttttgtgggtgctcgtttacatcctcaaaatccagtcctacatcct
ggaagccatcttaacttcagagtagaaggtttggatgatcaaattttaggccagtggttt
agtgccaatgaaagcattgtgtcagtagacttactatctggaaaagcagaagcaataagg
gaaggaactactcatgttatctttaatagttcgaatgtgcaactgcaaactgtagtgtcc
gtgctgaagcaaggtattttatctgtccatgctccaaatgagacacttacaaatgtacac
attcctgcaaaaggatatagtttcattgtgaaacttgatggttcgcacagtcaagatata
aaaactgctcaagacaccatagatatcttgtttgattgcaaggtggatccacctattggg
tatgtgaagccatggaaggactttgatactggtaattcatattgccttttcttcccatac
tctccagaacatttggtattctctagtcctgagtcaagaagcatgggacaaaagatgtct
gtttcaatctcagcttcattgaaaggagagaaacacgtctccagttctgcatcagcactg
tttgttggaggcttcagcattctagaagtagacagagactcgttacggttaaatctgaca
tcaggatcaattagaagcatcataaccattgtgggtaatacaaatgttgaaatgctttgg
catgacaaggatcggttatcagtcaggcccatccacagagataattctcagataggatgg
catgctcgctatgaggtcaaaattgataaagctgagaaatttagagataaattggttatc
aaactccctgctaccggtcagataatggaagttgatgttaactatgaccctgaagagaga
gaagcattaggaatatcagctacatatcctaatctcttgttattagcagttgtatgtatt
gctgtgtgtacattgtgtgctgctatcatcctttattacatggagcatgctgatagaatt
cgacagtcaaatactccaggcacaccaggtgtagcagcacctatcactcctcagcggagc
agtcctgctgtagtgaatgaagaatctcctcgaacacctcagccgttcctggactatgtt
aggaggacaatagatgagacaccatattacaggcaagactttaggaggagggccaatcct
cagaacaccttttag
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integrated database retrieval system
