KEGG   Ipomoea nil (Japanese morning glory): 109186622
Entry
109186622         CDS       T04663                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03420  Nucleotide excision repair
ini04120  Ubiquitin mediated proteolysis
ini04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109186622
   04120 Ubiquitin mediated proteolysis
    109186622
  09124 Replication and repair
   03420 Nucleotide excision repair
    109186622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109186622
   03400 DNA repair and recombination proteins [BR:ini03400]
    109186622
Enzymes [BR:ini01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109186622
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109186622
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109186622
   Cul2 complex
     109186622
   Cul3 complex
     109186622
   Cul4 complex
     109186622
   Cul7 complex
     109186622
   Cul8 complex
     109186622
   Cul9 complex
     109186622
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109186622
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109186622
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 109186622
NCBI-ProteinID: XP_019192232
LinkDB
Position
Un
AA seq 125 aa
MASLDTDVTMVPAGEGEGGAGATSSVASTSSSAKKGKKFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcatccttggacaccgatgtgactatggttccggccggcgagggcgagggcggcgcc
ggagcgacgtcttccgtggcgtcgacttcctcttcggccaagaaagggaagaaattcgag
atcaaaaagtggaacgccgttgctctttgggcctgggatattgtggtggataattgtgca
atttgtaggaaccacattatggatctctgtattgagtgtcaagctaatcaagctagtgca
acaagtgaggaatgcacggttgcttggggagtttgcaaccatgcatttcatttccactgc
atcagccgatggctcaaaactcgtcaagtgtgccccttggacaatagcgagtgggagttc
cagaagtatggtcactaa

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