Ipomoea nil (Japanese morning glory): 109186622
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Entry
109186622 CDS
T04663
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03420
Nucleotide excision repair
ini04120
Ubiquitin mediated proteolysis
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109186622
04120 Ubiquitin mediated proteolysis
109186622
09124 Replication and repair
03420 Nucleotide excision repair
109186622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109186622
03400 DNA repair and recombination proteins [BR:
ini03400
]
109186622
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
109186622
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109186622
Multi subunit type E3
SCF complex
Ring finger protein
109186622
Cul2 complex
109186622
Cul3 complex
109186622
Cul4 complex
109186622
Cul7 complex
109186622
Cul8 complex
109186622
Cul9 complex
109186622
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109186622
TCR (transcription coupled repair) factors
Cul4-CSA complex
109186622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
109186622
NCBI-ProteinID:
XP_019192232
LinkDB
All DBs
Position
Un
AA seq
125 aa
AA seq
DB search
MASLDTDVTMVPAGEGEGGAGATSSVASTSSSAKKGKKFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggcatccttggacaccgatgtgactatggttccggccggcgagggcgagggcggcgcc
ggagcgacgtcttccgtggcgtcgacttcctcttcggccaagaaagggaagaaattcgag
atcaaaaagtggaacgccgttgctctttgggcctgggatattgtggtggataattgtgca
atttgtaggaaccacattatggatctctgtattgagtgtcaagctaatcaagctagtgca
acaagtgaggaatgcacggttgcttggggagtttgcaaccatgcatttcatttccactgc
atcagccgatggctcaaaactcgtcaagtgtgccccttggacaatagcgagtgggagttc
cagaagtatggtcactaa
DBGET
integrated database retrieval system